PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Gene Pathway Family Confidence Status
Scup1815900075690 Phenylpropanoid C3'H/CYP98A low borderline
Scup1816890077060 Phenylpropanoid C3'H/CYP98A low borderline
Scup1817650078110 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1827380090890 Phenylpropanoid C3'H/CYP98A low borderline
Scup1828280092910 Phenylpropanoid C3'H/CYP98A low borderline
Scup1828310092970 Phenylpropanoid C3'H/CYP98A medium pass
Scup1829520095050 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1831130098100 Phenylpropanoid C3'H/CYP98A low borderline
Scup1831340098670 Phenylpropanoid C3'H/CYP98A low borderline
Scup1831370098720 Phenylpropanoid C3'H/CYP98A low borderline
Scup1833440101900 Phenylpropanoid C3'H/CYP98A low borderline
Scup1834830103840 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1837010108520 Phenylpropanoid C3'H/CYP98A high pass
Scup1838330110900 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1839030113030 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1840300114860 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1840300114870 Phenylpropanoid C3'H/CYP98A low borderline
Scup1840300114880 Phenylpropanoid C3'H/CYP98A low borderline
Scup1840600115150 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1841950118230 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1844070123030 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1844690124940 Phenylpropanoid C3'H/CYP98A low borderline
Scup1844920125370 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1847010129690 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1848450133850 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1850070138110 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1850810139900 Phenylpropanoid C3'H/CYP98A low borderline
Scup1853710147740 Phenylpropanoid C3'H/CYP98A low borderline
Scup1854850150770 Phenylpropanoid C3'H/CYP98A low borderline
Scup1856060155840 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1856840158170 Phenylpropanoid C3'H/CYP98A low borderline
Scup1857260159430 Phenylpropanoid C3'H/CYP98A medium pass
Scup1858490162960 Phenylpropanoid C3'H/CYP98A low borderline
Scup1860230168770 Phenylpropanoid C3'H/CYP98A low borderline
Scup1861180171540 Phenylpropanoid C3'H/CYP98A low borderline
Scup1861530172410 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1863180177580 Phenylpropanoid C3'H/CYP98A high pass
Scup1863450178560 Phenylpropanoid C3'H/CYP98A low borderline
Scup1864910184460 Phenylpropanoid C3'H/CYP98A low borderline
Scup1865810187780 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1865910188010 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1866630191410 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1867380195040 Phenylpropanoid C3'H/CYP98A low borderline
Scup1867610196320 Phenylpropanoid C3'H/CYP98A low borderline
Scup1868130198450 Phenylpropanoid C3'H/CYP98A low borderline
Scup1869290203590 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1870110207180 Phenylpropanoid C3'H/CYP98A high pass
Scup1870290208190 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1870340208460 Phenylpropanoid C3'H/CYP98A low borderline
Scup1870820210910 Phenylpropanoid C3'H/CYP98A low borderline