PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Scup1870900211490 Phenylpropanoid C3'H/CYP98A low borderline
Scup1871240212760 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1871490214110 Phenylpropanoid C3'H/CYP98A low borderline
Scup1871490214120 Phenylpropanoid C3'H/CYP98A medium pass
Scup1871610214530 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1872170216660 Phenylpropanoid C3'H/CYP98A low borderline
Scup1872240217090 Phenylpropanoid C3'H/CYP98A low borderline
Scup1872260217200 Phenylpropanoid C3'H/CYP98A low borderline
Scup1872800219640 Phenylpropanoid C3'H/CYP98A low borderline
Scup1873260221370 Phenylpropanoid C3'H/CYP98A low borderline
Scup1873890222930 Phenylpropanoid C3'H/CYP98A low borderline
Scup1876810225480 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1877720225940 Phenylpropanoid C3'H/CYP98A medium borderline
Scup1371880008080 Phenylpropanoid C4H/CYP73A medium borderline
Scup1740550031990 Phenylpropanoid C4H/CYP73A medium borderline
Scup1790110054170 Phenylpropanoid C4H/CYP73A low borderline
Scup1817180077370 Phenylpropanoid C4H/CYP73A medium borderline
Scup1850070138120 Phenylpropanoid C4H/CYP73A low borderline
Scup1851650142440 Phenylpropanoid C4H/CYP73A low borderline
Scup1853710147730 Phenylpropanoid C4H/CYP73A low borderline
Scup1854030148460 Phenylpropanoid C4H/CYP73A medium borderline
Scup1854030148470 Phenylpropanoid C4H/CYP73A medium pass
Scup1861530172400 Phenylpropanoid C4H/CYP73A low borderline
Scup1867380195050 Phenylpropanoid C4H/CYP73A low borderline
Scup1869290203580 Phenylpropanoid C4H/CYP73A low borderline
Scup1540510012470 Phenylpropanoid CAD low borderline
Scup1667690021580 Phenylpropanoid CAD low borderline
Scup1740300031950 Phenylpropanoid CAD medium pass
Scup1747090034530 Phenylpropanoid CAD low borderline
Scup1752530036300 Phenylpropanoid CAD low borderline
Scup1801200062130 Phenylpropanoid CAD low borderline
Scup1803320064310 Phenylpropanoid CAD medium pass
Scup1835810106290 Phenylpropanoid CAD medium borderline
Scup1841460116600 Phenylpropanoid CAD medium borderline
Scup1844660124830 Phenylpropanoid CAD low borderline
Scup1849100135670 Phenylpropanoid CAD low borderline
Scup1855910154920 Phenylpropanoid CAD medium pass
Scup1859030164760 Phenylpropanoid CAD medium pass
Scup1859490165970 Phenylpropanoid CAD low borderline
Scup1864670183550 Phenylpropanoid CAD medium pass
Scup1867980198140 Phenylpropanoid CAD low borderline
Scup1870810210890 Phenylpropanoid CAD medium borderline
Scup1872300217390 Phenylpropanoid CAD low borderline
Scup1624040016600 Phenylpropanoid CCR medium borderline
Scup1770240044580 Phenylpropanoid CCR low borderline
Scup1826560089710 Phenylpropanoid CCR low borderline
Scup1835380105090 Phenylpropanoid CCR medium borderline
Scup1849190135840 Phenylpropanoid CCR medium borderline
Scup1850970140750 Phenylpropanoid CCR low borderline
Scup1855120151550 Phenylpropanoid CCR medium borderline