PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

829
Candidate Protein Records
552
Pathway-Level Records
1531
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scup1872580218600 Phenylpropanoid CCR low borderline
Scup1804800066020 Phenylpropanoid CCoAOMT medium pass
Scup1812630074090 Phenylpropanoid CCoAOMT medium pass
Scup1794620058980 Phenylpropanoid COMT low borderline
Scup1822850085520 Phenylpropanoid COMT medium pass
Scup1835320104800 Phenylpropanoid COMT medium pass
Scup1835320104810 Phenylpropanoid COMT low borderline
Scup1849960137790 Phenylpropanoid COMT medium pass
Scup1855620153560 Phenylpropanoid COMT medium pass
Scup1863860180140 Phenylpropanoid COMT low borderline
Scup1864700183660 Phenylpropanoid COMT medium pass
Scup1870880211320 Phenylpropanoid COMT medium pass
Scup1873560222360 Phenylpropanoid COMT medium pass
Scup1874140223270 Phenylpropanoid COMT medium pass
Scup1744320033300 Phenylpropanoid CSE medium pass
Scup1784030049810 Phenylpropanoid CSE medium pass
Scup1785820051270 Phenylpropanoid CSE medium pass
Scup1793480057570 Phenylpropanoid CSE low borderline
Scup1816680076900 Phenylpropanoid CSE medium pass
Scup1822830085510 Phenylpropanoid CSE medium pass
Scup1826910090270 Phenylpropanoid CSE medium pass
Scup1852810146030 Phenylpropanoid CSE medium pass
Scup1858610163470 Phenylpropanoid CSE medium pass
Scup1862870176730 Phenylpropanoid CSE medium pass
Scup1870200207700 Phenylpropanoid CSE medium pass
Scup1873950223130 Phenylpropanoid CSE medium pass
Scup1767250042340 Phenylpropanoid F5H/CYP84A medium borderline
Scup1856990158500 Phenylpropanoid F5H/CYP84A medium borderline
Scup1857530160570 Phenylpropanoid F5H/CYP84A medium borderline
Scup1863080177220 Phenylpropanoid F5H/CYP84A medium borderline
Scup1863180177570 Phenylpropanoid F5H/CYP84A medium borderline
Scup1376970008100 Phenylpropanoid HCT medium pass
Scup1780750047410 Phenylpropanoid HCT medium pass
Scup1785040050300 Phenylpropanoid HCT medium pass
Scup1813550074430 Phenylpropanoid HCT medium pass
Scup1823640086490 Phenylpropanoid HCT medium pass
Scup1829490094970 Phenylpropanoid HCT medium pass
Scup1838240110690 Phenylpropanoid HCT medium pass
Scup1838740111930 Phenylpropanoid HCT medium pass
Scup1838740111940 Phenylpropanoid HCT medium pass
Scup1854070148510 Phenylpropanoid HCT low borderline
Scup1869330203900 Phenylpropanoid HCT medium pass
Scup1389790008590 Phenylpropanoid LAC medium pass
Scup1795000059600 Phenylpropanoid LAC medium pass
Scup1831960099930 Phenylpropanoid LAC low borderline
Scup1849280136080 Phenylpropanoid LAC medium pass
Scup1851500141840 Phenylpropanoid LAC medium pass
Scup1859930167620 Phenylpropanoid LAC low borderline
Scup1863770179700 Phenylpropanoid LAC medium pass
Scup1863770179740 Phenylpropanoid LAC low borderline