PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

829
Candidate Protein Records
552
Pathway-Level Records
1531
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Scup1868450200220 Phenylpropanoid LAC medium pass
Scup1872530218300 Phenylpropanoid LAC low borderline
Scup1881910226060 Phenylpropanoid LAC medium pass
Scup1881920226080 Phenylpropanoid LAC medium pass
Scup1640390019740 Phenylpropanoid PAL high pass
Scup1812350073890 Phenylpropanoid PAL high pass
Scup1817630078060 Phenylpropanoid PAL high pass
Scup1829110094650 Phenylpropanoid PAL high pass
Scup1842800120000 Phenylpropanoid PAL high pass
Scup1844090123090 Phenylpropanoid PAL high pass
Scup1844090123120 Phenylpropanoid PAL high pass
Scup1869230203320 Phenylpropanoid PAL high pass
Scup1873470222130 Phenylpropanoid PAL high pass
Scup1136320000720 Phenylpropanoid POD medium pass
Scup1150580001080 Phenylpropanoid POD medium pass
Scup1192600003440 Phenylpropanoid POD medium pass
Scup1352280006880 Phenylpropanoid POD medium pass
Scup1459980009260 Phenylpropanoid POD medium pass
Scup1631340017430 Phenylpropanoid POD low borderline
Scup1701730023440 Phenylpropanoid POD medium pass
Scup1701770023530 Phenylpropanoid POD medium pass
Scup1702030023770 Phenylpropanoid POD medium pass
Scup1707400024600 Phenylpropanoid POD medium pass
Scup1720560030070 Phenylpropanoid POD medium pass
Scup1720560030090 Phenylpropanoid POD medium pass
Scup1720910030200 Phenylpropanoid POD low borderline
Scup1752870036680 Phenylpropanoid POD medium pass
Scup1753830037290 Phenylpropanoid POD medium pass
Scup1761280038890 Phenylpropanoid POD medium pass
Scup1783330049330 Phenylpropanoid POD medium pass
Scup1790320054350 Phenylpropanoid POD medium pass
Scup1790960054750 Phenylpropanoid POD medium pass
Scup1792360056100 Phenylpropanoid POD medium pass
Scup1794390058510 Phenylpropanoid POD medium pass
Scup1800920061930 Phenylpropanoid POD medium pass
Scup1801330062310 Phenylpropanoid POD low borderline
Scup1802560063300 Phenylpropanoid POD medium pass
Scup1805290066600 Phenylpropanoid POD medium pass
Scup1805290066620 Phenylpropanoid POD medium pass
Scup1805290066650 Phenylpropanoid POD medium pass
Scup1810430071720 Phenylpropanoid POD medium pass
Scup1812630074110 Phenylpropanoid POD medium pass
Scup1813060074360 Phenylpropanoid POD medium pass
Scup1816020075990 Phenylpropanoid POD low borderline
Scup1816030076040 Phenylpropanoid POD medium pass
Scup1822640085260 Phenylpropanoid POD medium pass
Scup1825670088270 Phenylpropanoid POD medium pass
Scup1828760094030 Phenylpropanoid POD medium pass
Scup1832590101240 Phenylpropanoid POD medium pass
Scup1837420109300 Phenylpropanoid POD medium pass