PlantSME Plant secondary metabolism enzyme database

Schistidium cupulare (schistidium_cupulare)

Imported from atlas release summary for Schistidium cupulare.

552
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 151 11 POD (77) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 109 18 NMT (21) View species results
Flavonoid pathway 59 8 UFGT (18) View species results
Rosmarinic acid pathway 56 7 C4H (19) View species results
Steroid pathway 36 12 CAS (9) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 605 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 112 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Scup1854620150310 Steroid CAS medium pass
Scup1865530187110 Steroid CAS medium pass
Scup1869470204640 Steroid CAS medium pass
Scup1536500010790 Steroid CPD/CYP90A1 medium borderline
Scup1857130158870 Steroid CPD/CYP90A1 low borderline
Scup1858490162960 Steroid CPD/CYP90A1 medium borderline
Scup1860230168770 Steroid CPD/CYP90A1 medium borderline
Scup1867380195050 Steroid CPD/CYP90A1 low borderline
Scup1871490214110 Steroid CPD/CYP90A1 medium borderline
Scup1794620058930 Steroid CPI1 high pass
Scup1856060155840 Steroid CYP51G1 medium borderline
Scup1863080177220 Steroid CYP51G1 medium borderline
Scup1866630191410 Steroid CYP51G1 medium borderline
Scup1796140060470 Steroid CYP90D1 low borderline
Scup1810540071830 Steroid CYP90D1 low borderline
Scup1827380090890 Steroid CYP90D1 low borderline
Scup1864910184460 Steroid CYP90D1 medium borderline
Scup1870820210910 Steroid CYP90D1 low borderline
Scup1872260217200 Steroid CYP90D1 low borderline
Scup1876810225480 Steroid CYP90D1 low borderline
Scup1826610089840 Steroid DET2 low borderline
Scup1856290156590 Steroid DET2 low borderline
Scup1859570166140 Steroid DET2 medium pass
Scup1859730166780 Steroid DET2 low borderline
Scup1860200168470 Steroid DWF1 medium pass
Scup117170002410 Steroid DWF4/CYP90B1 low borderline
Scup1536990011070 Steroid DWF4/CYP90B1 medium borderline
Scup1637070018800 Steroid DWF4/CYP90B1 low borderline
Scup1715250027280 Steroid DWF4/CYP90B1 low borderline
Scup1753710037250 Steroid DWF4/CYP90B1 medium borderline
Scup1771500045200 Steroid DWF4/CYP90B1 low borderline
Scup1792970057020 Steroid DWF4/CYP90B1 low borderline
Scup1808770069670 Steroid DWF4/CYP90B1 low borderline
Scup1810510071770 Steroid DWF4/CYP90B1 low borderline
Scup1811420072740 Steroid DWF4/CYP90B1 low borderline
Scup1817180077370 Steroid DWF4/CYP90B1 low borderline
Scup1817650078110 Steroid DWF4/CYP90B1 low borderline
Scup1829520095050 Steroid DWF4/CYP90B1 medium borderline
Scup1831130098100 Steroid DWF4/CYP90B1 low borderline
Scup1831370098720 Steroid DWF4/CYP90B1 medium borderline
Scup1834830103840 Steroid DWF4/CYP90B1 low borderline
Scup1838330110900 Steroid DWF4/CYP90B1 low borderline
Scup1840300114860 Steroid DWF4/CYP90B1 low borderline
Scup1840300114880 Steroid DWF4/CYP90B1 medium borderline
Scup1841950118230 Steroid DWF4/CYP90B1 low borderline
Scup1844920125370 Steroid DWF4/CYP90B1 low borderline
Scup1847010129690 Steroid DWF4/CYP90B1 low borderline
Scup1850810139900 Steroid DWF4/CYP90B1 medium borderline
Scup1853710147740 Steroid DWF4/CYP90B1 low borderline
Scup1854850150770 Steroid DWF4/CYP90B1 low borderline