PlantSME Plant secondary metabolism enzyme database

Solanum lycopersicum (solanum_lycopersicum)

Imported from atlas release summary for Solanum lycopersicum.

2234
Candidate Protein Records
1896
Pathway-Level Records
4749
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 19 UGT (201) View species results
Alkaloid pathway 398 24 7DLGT (94) View species results
Phenylpropanoid pathway 382 12 POD (160) View species results
Flavonoid pathway 266 15 UFGT (174) View species results
Rosmarinic acid pathway 176 7 C4H (72) View species results
Steroid pathway 109 12 SMT1/SMT2/SMT3 (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1833 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Slyc02G0006140.1 Terpenoid HMGR medium pass
Slyc02G0022210.1 Terpenoid HMGR medium pass
Slyc03G0005280.1 Terpenoid HMGR medium pass
Slyc03G0005290.1 Terpenoid HMGR medium pass
Slyc07G0000470.1 Terpenoid HMGR low borderline
Slyc09G0017630.1 Terpenoid HMGR low borderline
Slyc08G0003120.1 Terpenoid HMGS high pass
Slyc08G0021900.1 Terpenoid HMGS medium pass
Slyc08G0021910.1 Terpenoid HMGS high pass
Slyc12G0018250.1 Terpenoid HMGS high pass
Slyc04G0016000.1 Terpenoid IDI medium pass
Slyc05G0024410.1 Terpenoid IDI medium pass
Slyc01G0033960.1 Terpenoid MCT/IspD high pass
Slyc08G0023390.1 Terpenoid MDS/IspF high pass
Slyc03G0029410.1 Terpenoid MVD low borderline
Slyc04G0003970.1 Terpenoid MVD medium pass
Slyc04G0003980.1 Terpenoid MVD medium pass
Slyc06G0018770.1 Terpenoid MVD low borderline
Slyc11G0002120.1 Terpenoid MVD low borderline
Slyc11G0002170.1 Terpenoid MVD medium pass
Slyc01G0013710.1 Terpenoid MVK low borderline
Slyc01G0030770.1 Terpenoid MVK medium pass
Slyc04G0002970.1 Terpenoid MVK low borderline
Slyc08G0018960.1 Terpenoid MVK low borderline
Slyc06G0017330.1 Terpenoid PMK medium pass
Slyc08G0017670.1 Terpenoid PMK medium pass
Slyc00G0006820.1 Terpenoid TPS medium pass
Slyc01G0033250.1 Terpenoid TPS medium pass
Slyc01G0033260.1 Terpenoid TPS medium pass
Slyc01G0033270.1 Terpenoid TPS medium pass
Slyc01G0033280.1 Terpenoid TPS medium pass
Slyc01G0033290.1 Terpenoid TPS medium pass
Slyc01G0037350.1 Terpenoid TPS medium pass
Slyc01G0037360.1 Terpenoid TPS medium pass
Slyc01G0037370.1 Terpenoid TPS medium pass
Slyc01G0037380.1 Terpenoid TPS medium pass
Slyc01G0037390.1 Terpenoid TPS medium pass
Slyc01G0037400.1 Terpenoid TPS medium pass
Slyc01G0037420.1 Terpenoid TPS medium pass
Slyc01G0037440.1 Terpenoid TPS medium pass
Slyc01G0037450.1 Terpenoid TPS medium pass
Slyc01G0037460.1 Terpenoid TPS medium pass
Slyc01G0037470.1 Terpenoid TPS medium pass
Slyc01G0037480.1 Terpenoid TPS medium pass
Slyc02G0019720.1 Terpenoid TPS medium pass
Slyc02G0019770.1 Terpenoid TPS medium pass
Slyc02G0019780.1 Terpenoid TPS medium pass
Slyc02G0019790.1 Terpenoid TPS medium pass
Slyc02G0019800.1 Terpenoid TPS medium pass
Slyc03G0001640.1 Terpenoid TPS low borderline