PlantSME Plant secondary metabolism enzyme database

Solanum lycopersicum (solanum_lycopersicum)

Imported from atlas release summary for Solanum lycopersicum.

1896
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 19 UGT (201) View species results
Alkaloid pathway 398 24 7DLGT (94) View species results
Phenylpropanoid pathway 382 12 POD (160) View species results
Flavonoid pathway 266 15 UFGT (174) View species results
Rosmarinic acid pathway 176 7 C4H (72) View species results
Steroid pathway 109 12 SMT1/SMT2/SMT3 (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1833 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Slyc02G0014990.1 Alkaloid CODM/T6ODM medium borderline
Slyc02G0015000.1 Alkaloid CODM/T6ODM medium borderline
Slyc02G0015030.1 Alkaloid CODM/T6ODM medium borderline
Slyc02G0015040.1 Alkaloid CODM/T6ODM medium borderline
Slyc02G0015050.1 Alkaloid CODM/T6ODM medium borderline
Slyc02G0034120.1 Alkaloid CODM/T6ODM medium borderline
Slyc03G0002010.1 Alkaloid CODM/T6ODM medium borderline
Slyc03G0014610.1 Alkaloid CODM/T6ODM medium borderline
Slyc03G0018430.1 Alkaloid CODM/T6ODM medium borderline
Slyc03G0018440.1 Alkaloid CODM/T6ODM medium borderline
Slyc03G0018570.1 Alkaloid CODM/T6ODM medium borderline
Slyc03G0031680.1 Alkaloid CODM/T6ODM medium borderline
Slyc04G0002120.1 Alkaloid CODM/T6ODM medium borderline
Slyc04G0002880.1 Alkaloid CODM/T6ODM medium borderline
Slyc04G0004180.1 Alkaloid CODM/T6ODM medium borderline
Slyc04G0004190.1 Alkaloid CODM/T6ODM medium borderline
Slyc04G0014720.1 Alkaloid CODM/T6ODM medium borderline
Slyc05G0011650.1 Alkaloid CODM/T6ODM medium borderline
Slyc05G0021220.1 Alkaloid CODM/T6ODM medium borderline
Slyc05G0021820.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0006580.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0008900.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0011310.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0017860.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0018350.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0018360.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0022560.1 Alkaloid CODM/T6ODM medium borderline
Slyc06G0026620.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0008540.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0013350.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0018450.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0018490.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0020290.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0020370.1 Alkaloid CODM/T6ODM medium borderline
Slyc07G0020380.1 Alkaloid CODM/T6ODM medium borderline
Slyc08G0001960.1 Alkaloid CODM/T6ODM medium borderline
Slyc08G0005910.1 Alkaloid CODM/T6ODM medium borderline
Slyc08G0010760.1 Alkaloid CODM/T6ODM medium borderline
Slyc08G0010780.1 Alkaloid CODM/T6ODM medium borderline
Slyc08G0019770.1 Alkaloid CODM/T6ODM low borderline
Slyc08G0021780.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0003270.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0008660.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021450.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021460.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021480.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021490.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021500.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021510.1 Alkaloid CODM/T6ODM medium borderline
Slyc09G0021530.1 Alkaloid CODM/T6ODM medium borderline