PlantSME Plant secondary metabolism enzyme database

Solanum lycopersicum (solanum_lycopersicum)

Imported from atlas release summary for Solanum lycopersicum.

2234
Candidate Protein Records
1896
Pathway-Level Records
4749
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 19 UGT (201) View species results
Alkaloid pathway 398 24 7DLGT (94) View species results
Phenylpropanoid pathway 382 12 POD (160) View species results
Flavonoid pathway 266 15 UFGT (174) View species results
Rosmarinic acid pathway 176 7 C4H (72) View species results
Steroid pathway 109 12 SMT1/SMT2/SMT3 (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1833 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Slyc07G0008540.1 Flavonoid F3H medium borderline
Slyc07G0012760.1 Flavonoid F3H medium borderline
Slyc07G0013350.1 Flavonoid F3H medium borderline
Slyc07G0014890.1 Flavonoid F3H medium borderline
Slyc07G0014910.1 Flavonoid F3H medium borderline
Slyc07G0018400.1 Flavonoid F3H medium borderline
Slyc07G0018450.1 Flavonoid F3H medium borderline
Slyc07G0018460.1 Flavonoid F3H medium borderline
Slyc07G0018490.1 Flavonoid F3H medium borderline
Slyc07G0018500.1 Flavonoid F3H medium borderline
Slyc08G0001960.1 Flavonoid F3H medium borderline
Slyc08G0001970.1 Flavonoid F3H medium borderline
Slyc08G0005910.1 Flavonoid F3H medium borderline
Slyc08G0020020.1 Flavonoid F3H low borderline
Slyc08G0021780.1 Flavonoid F3H medium borderline
Slyc09G0002780.1 Flavonoid F3H medium borderline
Slyc09G0003270.1 Flavonoid F3H medium borderline
Slyc09G0004190.1 Flavonoid F3H medium borderline
Slyc09G0004200.1 Flavonoid F3H medium borderline
Slyc09G0004210.1 Flavonoid F3H medium borderline
Slyc09G0004230.1 Flavonoid F3H medium borderline
Slyc09G0008650.1 Flavonoid F3H low borderline
Slyc09G0008660.1 Flavonoid F3H medium borderline
Slyc09G0011150.1 Flavonoid F3H low borderline
Slyc09G0016710.1 Flavonoid F3H medium borderline
Slyc09G0016720.1 Flavonoid F3H medium borderline
Slyc09G0021350.1 Flavonoid F3H medium borderline
Slyc09G0021450.1 Flavonoid F3H medium borderline
Slyc09G0021460.1 Flavonoid F3H medium borderline
Slyc09G0021470.1 Flavonoid F3H low borderline
Slyc09G0021480.1 Flavonoid F3H medium borderline
Slyc09G0021490.1 Flavonoid F3H medium borderline
Slyc09G0021500.1 Flavonoid F3H medium borderline
Slyc09G0021510.1 Flavonoid F3H medium borderline
Slyc09G0021520.1 Flavonoid F3H medium borderline
Slyc09G0021530.1 Flavonoid F3H medium borderline
Slyc09G0021540.1 Flavonoid F3H medium borderline
Slyc09G0021550.1 Flavonoid F3H medium borderline
Slyc09G0021560.1 Flavonoid F3H medium borderline
Slyc09G0021570.1 Flavonoid F3H medium borderline
Slyc09G0021580.1 Flavonoid F3H medium borderline
Slyc09G0021590.1 Flavonoid F3H medium borderline
Slyc09G0021600.1 Flavonoid F3H medium borderline
Slyc09G0021610.1 Flavonoid F3H low borderline
Slyc10G0000120.1 Flavonoid F3H medium borderline
Slyc10G0000370.1 Flavonoid F3H medium borderline
Slyc10G0006260.1 Flavonoid F3H medium borderline
Slyc10G0006280.1 Flavonoid F3H medium borderline
Slyc10G0007570.1 Flavonoid F3H medium borderline
Slyc10G0007600.1 Flavonoid F3H medium borderline