PlantSME Plant secondary metabolism enzyme database

Sonneratia caseolaris (sonneratia_caseolaris)

Imported from atlas release summary for Sonneratia caseolaris.

1254
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 368 20 BAHD (145) View species results
Phenylpropanoid pathway 273 11 POD (129) View species results
Alkaloid pathway 271 21 NMT (38) View species results
Flavonoid pathway 155 10 UFGT (86) View species results
Rosmarinic acid pathway 100 7 C4H (29) View species results
Steroid pathway 87 11 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1020 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status Best Target
sonneratia_caseolaris_Sc2_17085 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_17087 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_17088 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_17089 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_17091 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_17092 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_17469 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_18030 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_18499 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_19290 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_19403 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_20700 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
sonneratia_caseolaris_Sc2_20747 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_20825 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_21902 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_22611 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_22863 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_23043 Flavonoid F3H medium borderline F3H__00003__sp_Q7XM21_FL3H1_ORYSJ
sonneratia_caseolaris_Sc2_23269 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
sonneratia_caseolaris_Sc2_23377 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_24289 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
sonneratia_caseolaris_Sc2_25714 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_26068 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
sonneratia_caseolaris_Sc2_26080 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_26652 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
sonneratia_caseolaris_Sc2_26788 Flavonoid F3H low borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_27503 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
sonneratia_caseolaris_Sc2_27993 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ