PlantSME Plant secondary metabolism enzyme database

Sonneratia caseolaris (sonneratia_caseolaris)

Imported from atlas release summary for Sonneratia caseolaris.

1254
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 368 20 BAHD (145) View species results
Phenylpropanoid pathway 273 11 POD (129) View species results
Alkaloid pathway 271 21 NMT (38) View species results
Flavonoid pathway 155 10 UFGT (86) View species results
Rosmarinic acid pathway 100 7 C4H (29) View species results
Steroid pathway 87 11 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1020 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
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Gene Pathway Family Confidence Status
sonneratia_caseolaris_Sc2_03830 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_03831 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_03832 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_03834 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_03835 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_05101 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_05183 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_05184 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_05185 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_07459 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_09448 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_10290 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_10292 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_10293 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_11134 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_11647 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_11648 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_13272 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_13766 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_13767 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_14395 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_15200 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_15246 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_17561 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_18524 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_18525 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_18807 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_19605 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_19606 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_20164 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_21704 Rosmarinic Acid TAT low borderline
sonneratia_caseolaris_Sc2_25821 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_26754 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_27192 Rosmarinic Acid TAT medium pass
sonneratia_caseolaris_Sc2_28017 Rosmarinic Acid TAT low borderline