PlantSME Plant secondary metabolism enzyme database

Sonneratia caseolaris (sonneratia_caseolaris)

Imported from atlas release summary for Sonneratia caseolaris.

1254
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 368 20 BAHD (145) View species results
Phenylpropanoid pathway 273 11 POD (129) View species results
Alkaloid pathway 271 21 NMT (38) View species results
Flavonoid pathway 155 10 UFGT (86) View species results
Rosmarinic acid pathway 100 7 C4H (29) View species results
Steroid pathway 87 11 SMT1/SMT2/SMT3 (30) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1020 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
sonneratia_caseolaris_Sc2_02267 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_04629 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_04757 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_06903 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_07511 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_08422 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_08424 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_08427 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_08428 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_08732 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_09296 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_09418 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_10256 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_12725 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_14703 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_14961 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_15411 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_15820 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_16428 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_17153 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_19066 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_20508 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_20819 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_21177 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_21178 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_22262 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_25920 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_26534 Alkaloid GS low borderline
sonneratia_caseolaris_Sc2_26535 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_26536 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_26537 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_26538 Alkaloid GS high pass
sonneratia_caseolaris_Sc2_26539 Alkaloid GS medium pass
sonneratia_caseolaris_Sc2_26626 Alkaloid GS high pass