Sonneratia caseolaris (sonneratia_caseolaris)
Imported from atlas release summary for Sonneratia caseolaris.
1254
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1254
Candidate Genes
BAHD
6.59%
C4H
5.85%
POD
4.64%
C3'H/CYP98A
4.64%
4CL
4.03%
UGT
3.58%
CYP76
3.52%
IFS
3.39%
Other Families
63.78%
More Families (96)
7DLGT
103
3.29%
UFGT
94
3.01%
NMT
84
2.69%
T3O
78
2.49%
F3H
78
2.49%
CAD
67
2.14%
DWF4/CYP90B1
63
2.01%
CODM/T6ODM
59
1.89%
STR
53
1.69%
F3'H/CYP75B
52
1.66%
SMT1/SMT2/SMT3
47
1.5%
IFR
46
1.47%
TRI/TRII
45
1.44%
BR6OX2/CYP85A2
41
1.31%
TPS
41
1.31%
H6H
40
1.28%
LAC
39
1.25%
CAS
38
1.21%
CSE
37
1.18%
GES
36
1.15%
PYKS
36
1.15%
HCT
36
1.15%
TAT
35
1.12%
G8O/G8H
34
1.09%
GS
34
1.09%
CYP71
29
0.93%
SGD
27
0.86%
T16H
27
0.86%
ANR
26
0.83%
CCR
25
0.8%
RAS
25
0.8%
FNS
23
0.74%
IO
22
0.7%
COMT
22
0.7%
SLS
20
0.64%
PAL
18
0.58%
ANS/LDOX
18
0.58%
F5H/CYP84A
18
0.58%
BBE
17
0.54%
PMT
16
0.51%
8HGO
16
0.51%
CYP90D1
16
0.51%
DFR
15
0.48%
F3'5'H/CYP75A
15
0.48%
LAMT
14
0.45%
7DLH
13
0.42%
CHS
13
0.42%
BR6OX1/CYP85A1
13
0.42%
COR
12
0.38%
ROT3/CYP90C1
12
0.38%
FPPS
11
0.35%
CPR
10
0.32%
SQS/FDFT1
10
0.32%
CNMT
9
0.29%
NCS
9
0.29%
MPO
9
0.29%
SMO1/SMO2
9
0.29%
CPD/CYP90A1
8
0.26%
SQE
7
0.22%
GGPPS
7
0.22%
AACT
7
0.22%
HMGR
7
0.22%
16OMT
6
0.19%
ADC
6
0.19%
CCoAOMT
6
0.19%
MVK
6
0.19%
CHI
5
0.16%
HPPR
5
0.16%
CYP51G1
5
0.16%
MVD
5
0.16%
TYDC_DDC
4
0.13%
CYP80B1
4
0.13%
CYP719
4
0.13%
ISY
4
0.13%
DET2
4
0.13%
IDI
4
0.13%
TDC
3
0.1%
DWF7
3
0.1%
DXS
3
0.1%
HMGS
3
0.1%
CYP80F1
2
0.06%
FK
2
0.06%
CMK/IspE
2
0.06%
HDS/IspG
2
0.06%
PMK
2
0.06%
MCT/IspD
2
0.06%
DXR
2
0.06%
MDS/IspF
2
0.06%
6OMT_4OMT_SOMT
1
0.03%
ODC
1
0.03%
DWF1
1
0.03%
HYD1
1
0.03%
CPI1
1
0.03%
DWF5
1
0.03%
GPPS
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 368 | 20 | BAHD (145) | View species results |
| Phenylpropanoid pathway | 273 | 11 | POD (129) | View species results |
| Alkaloid pathway | 271 | 21 | NMT (38) | View species results |
| Flavonoid pathway | 155 | 10 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 100 | 7 | C4H (29) | View species results |
| Steroid pathway | 87 | 11 | SMT1/SMT2/SMT3 (30) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1020 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 267 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| sonneratia_caseolaris_Sc2_00035 | Terpenoid | UGT | medium | pass | UGT__00071__sp_Q6VAA6_U74G1_STERE |
| sonneratia_caseolaris_Sc2_00047 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| sonneratia_caseolaris_Sc2_00446 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| sonneratia_caseolaris_Sc2_01674 | Terpenoid | UGT | medium | pass | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| sonneratia_caseolaris_Sc2_01675 | Terpenoid | UGT | medium | pass | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| sonneratia_caseolaris_Sc2_01676 | Terpenoid | UGT | medium | pass | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| sonneratia_caseolaris_Sc2_01691 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| sonneratia_caseolaris_Sc2_02264 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| sonneratia_caseolaris_Sc2_02265 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| sonneratia_caseolaris_Sc2_03166 | Terpenoid | UGT | medium | pass | UGT__00016__sp_A0A193AUF6_GGT23_PUNGR |
| sonneratia_caseolaris_Sc2_03256 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| sonneratia_caseolaris_Sc2_03605 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| sonneratia_caseolaris_Sc2_03710 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| sonneratia_caseolaris_Sc2_04690 | Terpenoid | UGT | medium | pass | UGT__00012__sp_A0A0M4KE44_CGT_MANIN |
| sonneratia_caseolaris_Sc2_04694 | Terpenoid | UGT | medium | pass | UGT__00012__sp_A0A0M4KE44_CGT_MANIN |
| sonneratia_caseolaris_Sc2_04695 | Terpenoid | UGT | medium | pass | UGT__00012__sp_A0A0M4KE44_CGT_MANIN |
| sonneratia_caseolaris_Sc2_04696 | Terpenoid | UGT | medium | pass | UGT__00012__sp_A0A0M4KE44_CGT_MANIN |
| sonneratia_caseolaris_Sc2_05411 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| sonneratia_caseolaris_Sc2_05550 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| sonneratia_caseolaris_Sc2_06179 | Terpenoid | UGT | low | borderline | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| sonneratia_caseolaris_Sc2_06384 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| sonneratia_caseolaris_Sc2_06385 | Terpenoid | UGT | low | borderline | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| sonneratia_caseolaris_Sc2_06440 | Terpenoid | UGT | low | borderline | UGT__00104__sp_Q9S9P6_U78D1_ARATH |
| sonneratia_caseolaris_Sc2_06446 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| sonneratia_caseolaris_Sc2_06447 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| sonneratia_caseolaris_Sc2_06747 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| sonneratia_caseolaris_Sc2_07349 | Terpenoid | UGT | medium | pass | UGT__00063__sp_P0DO67_GT943_SIRGR |
| sonneratia_caseolaris_Sc2_07450 | Terpenoid | UGT | medium | pass | UGT__00117__sp_U5NH37_7DLGT_CATRO |
| sonneratia_caseolaris_Sc2_07451 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| sonneratia_caseolaris_Sc2_08730 | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| sonneratia_caseolaris_Sc2_09415 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| sonneratia_caseolaris_Sc2_09416 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| sonneratia_caseolaris_Sc2_09417 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| sonneratia_caseolaris_Sc2_09740 | Terpenoid | UGT | low | borderline | UGT__00024__sp_B3VI56_U91D2_STERE |
| sonneratia_caseolaris_Sc2_10077 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| sonneratia_caseolaris_Sc2_10171 | Terpenoid | UGT | medium | pass | UGT__00102__sp_Q9LZD8_U89A2_ARATH |
| sonneratia_caseolaris_Sc2_10379 | Terpenoid | UGT | medium | pass | UGT__00077__sp_Q8VZE9_U73B1_ARATH |
| sonneratia_caseolaris_Sc2_11031 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| sonneratia_caseolaris_Sc2_11268 | Terpenoid | UGT | low | borderline | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| sonneratia_caseolaris_Sc2_11356 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| sonneratia_caseolaris_Sc2_11753 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| sonneratia_caseolaris_Sc2_11872 | Terpenoid | UGT | low | borderline | UGT__00049__sp_O22820_U74F1_ARATH |
| sonneratia_caseolaris_Sc2_12334 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| sonneratia_caseolaris_Sc2_12351 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| sonneratia_caseolaris_Sc2_12352 | Terpenoid | UGT | low | borderline | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| sonneratia_caseolaris_Sc2_12727 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| sonneratia_caseolaris_Sc2_12728 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| sonneratia_caseolaris_Sc2_12729 | Terpenoid | UGT | low | borderline | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| sonneratia_caseolaris_Sc2_13109 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| sonneratia_caseolaris_Sc2_13626 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |