PlantSME Plant secondary metabolism enzyme database

Sphaerocarpos donnellii (sphaerocarpos_donnellii)

Imported from atlas release summary for Sphaerocarpos donnellii.

687
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 33.77% Terpenoid pathway 20.38% Alkaloid pathway 17.32% Flavonoid pathway 11.79% Rosmarinic acid pathway 10.48% Steroid pathway 6.26%
Family Distribution
POD 9.05% C4H 6.82% C3'H/CYP98A 5.9% 4CL 4.47% BAHD 4.47% CYP76 4.3% NMT 3.9% T3O 3.21%
Other Families 57.88%
More Families (95)
IFS 50 2.87% BR6OX2/CYP85A2 40 2.29% STR 39 2.23% 7DLGT 37 2.12% UGT 36 2.06% UFGT 33 1.89% DWF4/CYP90B1 33 1.89% COMT 32 1.83% F3H 27 1.55% IFR 27 1.55% PAL 24 1.38% CSE 24 1.38% F3'H/CYP75B 23 1.32% PYKS 22 1.26% CODM/T6ODM 20 1.15% BBE 20 1.15% GS 19 1.09% FNS 19 1.09% CAS 19 1.09% TPS 19 1.09% CAD 18 1.03% G8O/G8H 17 0.97% H6H 17 0.97% IO 16 0.92% HCT 16 0.92% GGPPS 16 0.92% CHS 15 0.86% RAS 15 0.86% TRI/TRII 14 0.8% SMT1/SMT2/SMT3 14 0.8% CYP71 14 0.8% T16H 13 0.74% F3'5'H/CYP75A 13 0.74% BR6OX1/CYP85A1 12 0.69% CPD/CYP90A1 12 0.69% GES 11 0.63% CNMT 9 0.52% ANR 8 0.46% DWF1 8 0.46% COR 7 0.4% SLS 7 0.4% DFR 7 0.4% CPR 7 0.4% CYP719 6 0.34% 8HGO 6 0.34% F5H/CYP84A 6 0.34% CCR 6 0.34% CYP90D1 6 0.34% AACT 6 0.34% 16OMT 5 0.29% PMT 5 0.29% ANS/LDOX 5 0.29% LAC 5 0.29% CCoAOMT 5 0.29% FPPS 5 0.29% MVD 5 0.29% ISY 4 0.23% SGD 4 0.23% CHI 4 0.23% TAT 4 0.23% ROT3/CYP90C1 4 0.23% SQS/FDFT1 4 0.23% CYP80B1 3 0.17% ODC 3 0.17% 7DLH 3 0.17% LAMT 3 0.17% CYP51G1 3 0.17% SMO1/SMO2 3 0.17% SQE 3 0.17% MVK 3 0.17% HMGR 3 0.17% MCT/IspD 3 0.17% CMK/IspE 3 0.17% MPO 2 0.11% TDC 2 0.11% NCS 2 0.11% HYD1 2 0.11% DET2 2 0.11% CPI1 2 0.11% DWF7 2 0.11% DXR 2 0.11% DXS 2 0.11% HDR/IspH 2 0.11% HMGS 2 0.11% ADC 1 0.06% TYDC_DDC 1 0.06% CYP80F1 1 0.06% 6OMT_4OMT_SOMT 1 0.06% HPPR 1 0.06% FK 1 0.06% DWF5 1 0.06% HDS/IspG 1 0.06% MDS/IspF 1 0.06% IDI 1 0.06% PMK 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 232 12 POD (147) View species results
Terpenoid pathway 140 20 BAHD (50) View species results
Alkaloid pathway 119 18 NMT (25) View species results
Flavonoid pathway 81 10 UFGT (27) View species results
Rosmarinic acid pathway 72 7 C4H (37) View species results
Steroid pathway 43 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 635 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Sdon2030001080 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sdon398310005170 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sdon417280007590 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Sdon440550011270 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Sdon452210013280 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sdon459390014540 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Sdon503240022020 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sdon527530029360 Terpenoid BAHD low borderline BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Sdon527530029370 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Sdon527890029950 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
Sdon529820033860 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Sdon530680035960 Terpenoid BAHD medium pass BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Sdon543870041750 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Sdon572220052600 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Sdon572480053230 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sdon587020055770 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Sdon587020055810 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Sdon616580069610 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Sdon621840071260 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Sdon647060073590 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Sdon649400075030 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Sdon650150075700 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
Sdon656590081750 Terpenoid BAHD low borderline BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
Sdon676970085610 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sdon677780086570 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sdon681170090110 Terpenoid BAHD medium pass BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Sdon688460094750 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Sdon691240097300 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Sdon696870098090 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Sdon700680103740 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Sdon703690109860 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Sdon704210110490 Terpenoid BAHD medium pass BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Sdon706070113620 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Sdon711790117090 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Sdon712010117540 Terpenoid BAHD medium pass BAHD__00062__sp_Q93V61_LCAT3_ARATH
Sdon713640121630 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Sdon718530127450 Terpenoid BAHD low borderline BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Sdon720110128570 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sdon720610128980 Terpenoid BAHD medium pass BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Sdon728370133360 Terpenoid BAHD medium pass BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Sdon740410146780 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Sdon740830147390 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Sdon744600153940 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Sdon745920155770 Terpenoid BAHD low borderline BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Sdon746280156550 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Sdon746810156810 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Sdon748480159030 Terpenoid BAHD medium pass BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Sdon748660159600 Terpenoid BAHD low borderline BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Sdon755750169500 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Sdon758300175500 Terpenoid BAHD low borderline BAHD__00093__sp_Q9SV07_ASAT1_ARATH