Sphaerocarpos donnellii (sphaerocarpos_donnellii)
Imported from atlas release summary for Sphaerocarpos donnellii.
687
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
687
Candidate Genes
POD
9.05%
C4H
6.82%
C3'H/CYP98A
5.9%
4CL
4.47%
BAHD
4.47%
CYP76
4.3%
NMT
3.9%
T3O
3.21%
Other Families
57.88%
More Families (95)
IFS
50
2.87%
BR6OX2/CYP85A2
40
2.29%
STR
39
2.23%
7DLGT
37
2.12%
UGT
36
2.06%
UFGT
33
1.89%
DWF4/CYP90B1
33
1.89%
COMT
32
1.83%
F3H
27
1.55%
IFR
27
1.55%
PAL
24
1.38%
CSE
24
1.38%
F3'H/CYP75B
23
1.32%
PYKS
22
1.26%
CODM/T6ODM
20
1.15%
BBE
20
1.15%
GS
19
1.09%
FNS
19
1.09%
CAS
19
1.09%
TPS
19
1.09%
CAD
18
1.03%
G8O/G8H
17
0.97%
H6H
17
0.97%
IO
16
0.92%
HCT
16
0.92%
GGPPS
16
0.92%
CHS
15
0.86%
RAS
15
0.86%
TRI/TRII
14
0.8%
SMT1/SMT2/SMT3
14
0.8%
CYP71
14
0.8%
T16H
13
0.74%
F3'5'H/CYP75A
13
0.74%
BR6OX1/CYP85A1
12
0.69%
CPD/CYP90A1
12
0.69%
GES
11
0.63%
CNMT
9
0.52%
ANR
8
0.46%
DWF1
8
0.46%
COR
7
0.4%
SLS
7
0.4%
DFR
7
0.4%
CPR
7
0.4%
CYP719
6
0.34%
8HGO
6
0.34%
F5H/CYP84A
6
0.34%
CCR
6
0.34%
CYP90D1
6
0.34%
AACT
6
0.34%
16OMT
5
0.29%
PMT
5
0.29%
ANS/LDOX
5
0.29%
LAC
5
0.29%
CCoAOMT
5
0.29%
FPPS
5
0.29%
MVD
5
0.29%
ISY
4
0.23%
SGD
4
0.23%
CHI
4
0.23%
TAT
4
0.23%
ROT3/CYP90C1
4
0.23%
SQS/FDFT1
4
0.23%
CYP80B1
3
0.17%
ODC
3
0.17%
7DLH
3
0.17%
LAMT
3
0.17%
CYP51G1
3
0.17%
SMO1/SMO2
3
0.17%
SQE
3
0.17%
MVK
3
0.17%
HMGR
3
0.17%
MCT/IspD
3
0.17%
CMK/IspE
3
0.17%
MPO
2
0.11%
TDC
2
0.11%
NCS
2
0.11%
HYD1
2
0.11%
DET2
2
0.11%
CPI1
2
0.11%
DWF7
2
0.11%
DXR
2
0.11%
DXS
2
0.11%
HDR/IspH
2
0.11%
HMGS
2
0.11%
ADC
1
0.06%
TYDC_DDC
1
0.06%
CYP80F1
1
0.06%
6OMT_4OMT_SOMT
1
0.06%
HPPR
1
0.06%
FK
1
0.06%
DWF5
1
0.06%
HDS/IspG
1
0.06%
MDS/IspF
1
0.06%
IDI
1
0.06%
PMK
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 232 | 12 | POD (147) | View species results |
| Terpenoid pathway | 140 | 20 | BAHD (50) | View species results |
| Alkaloid pathway | 119 | 18 | NMT (25) | View species results |
| Flavonoid pathway | 81 | 10 | UFGT (27) | View species results |
| Rosmarinic acid pathway | 72 | 7 | C4H (37) | View species results |
| Steroid pathway | 43 | 12 | CAS (17) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 635 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 109 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Sdon388660003070 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon530390035050 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon534130037820 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon544480042090 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon570190049470 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon603810062050 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon615910069440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon655540080650 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon679070087700 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon689970095730 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon691050097100 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon697130098330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon699160100430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon702620106670 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon702950107710 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon702960107730 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon703330108940 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sdon713660121760 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon729960135320 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon729960135330 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon732070138000 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon732830139780 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon737490145260 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon737690145650 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sdon756990172250 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon758040175160 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon761000178860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon763040184770 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sdon764630188540 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon765020190840 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon766360193060 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon766560193360 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon769640200200 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sdon770910203860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon777720223860 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon787850246430 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon787850246440 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Sdon788170247240 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Sdon798060256280 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |