PlantSME Plant secondary metabolism enzyme database

Spirogloea muscicola (spirogloea_muscicola)

Imported from atlas release summary for Spirogloea muscicola.

887
Candidate Protein Records
434
Pathway-Level Records
1190
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 33.87% Alkaloid pathway 26.04% Phenylpropanoid pathway 20.97% Steroid pathway 10.6% Rosmarinic acid pathway 4.61% Flavonoid pathway 3.92%
Family Distribution
BAHD 10.92% 4CL 10.84% NMT 6.05% POD 4.71% IFR 4.12% STR 3.7% GS 3.53% SMT1/SMT2/SMT3 2.94%
Other Families 53.19%
More Families (88)
CYP71 35 2.94% CSE 30 2.52% C3'H/CYP98A 30 2.52% C4H 28 2.35% CAD 22 1.85% CNMT 20 1.68% CYP76 20 1.68% TRI/TRII 19 1.6% SGD 16 1.34% AACT 15 1.26% IFS 14 1.18% FNS 13 1.09% CPR 13 1.09% T3O 11 0.92% PYKS 11 0.92% COR 11 0.92% DFR 10 0.84% CAS 10 0.84% SQS/FDFT1 10 0.84% BR6OX2/CYP85A2 10 0.84% DWF4/CYP90B1 10 0.84% MVK 10 0.84% F3H 9 0.76% TAT 9 0.76% GGPPS 9 0.76% SLS 8 0.67% CPD/CYP90A1 8 0.67% SMO1/SMO2 8 0.67% DET2 7 0.59% 8HGO 6 0.5% PMT 6 0.5% PAL 6 0.5% CHS 6 0.5% CCoAOMT 6 0.5% COMT 6 0.5% FPPS 6 0.5% MVD 6 0.5% IO 5 0.42% 6OMT_4OMT_SOMT 5 0.42% CHI 5 0.42% F3'5'H/CYP75A 5 0.42% LAC 5 0.42% RAS 5 0.42% HDR/IspH 5 0.42% CYP719 4 0.34% H6H 4 0.34% ISY 4 0.34% ANR 4 0.34% CCR 4 0.34% F5H/CYP84A 4 0.34% CYP51G1 4 0.34% HYD1 4 0.34% ODC 3 0.25% NCS 3 0.25% G8O/G8H 3 0.25% MPO 3 0.25% CODM/T6ODM 3 0.25% ADC 3 0.25% CYP80B1 3 0.25% T16H 3 0.25% TDC 3 0.25% F3'H/CYP75B 3 0.25% HPPR 3 0.25% DWF1 3 0.25% ROT3/CYP90C1 3 0.25% DWF7 3 0.25% FK 3 0.25% DWF5 3 0.25% CPI1 3 0.25% UGT 3 0.25% HDS/IspG 3 0.25% PMK 3 0.25% HMGR 3 0.25% HMGS 3 0.25% DXS 3 0.25% CMK/IspE 3 0.25% IDI 3 0.25% MDS/IspF 3 0.25% CYP80F1 2 0.17% XMT_MXMT_DXMT 2 0.17% 7DLGT 2 0.17% UFGT 2 0.17% BBE 1 0.08% LAMT 1 0.08% FLS 1 0.08% BR6OX1/CYP85A1 1 0.08% CYP90D1 1 0.08% GPPS 1 0.08%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 147 15 BAHD (83) View species results
Alkaloid pathway 113 15 NMT (34) View species results
Phenylpropanoid pathway 91 7 POD (48) View species results
Steroid pathway 46 9 SMT1/SMT2/SMT3 (14) View species results
Rosmarinic acid pathway 20 4 CPR (10) View species results
Flavonoid pathway 17 6 4CL (4) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 215 BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 2 135 BAHD, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
Smuss510202150 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Smuss52330204220 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
Smuss540206850 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Smuss580213140 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Smuss640222550 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Smuss740238460 Phenylpropanoid POD low borderline POD__00003__sp_A9PCL4_PRX2_POPTR
Smuss7490238990 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
Smuss7800244130 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Smuss840253050 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Smuss850254450 Phenylpropanoid POD medium pass POD__00024__sp_Q9SCX8_PPA17_ARATH
Smuss900262070 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Smuss930265230 Phenylpropanoid POD low borderline POD__00026__sp_Q9XEX2_PRX2B_ARATH