PlantSME Plant secondary metabolism enzyme database

Tetraphis pellucida (tetraphis_pellucida)

Imported from atlas release summary for Tetraphis pellucida.

693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 178 10 POD (102) View species results
Terpenoid pathway 165 19 BAHD (61) View species results
Alkaloid pathway 140 19 7DLGT (33) View species results
Flavonoid pathway 102 8 UFGT (47) View species results
Rosmarinic acid pathway 68 7 C4H (27) View species results
Steroid pathway 40 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Tpelscaffold_40071000 Steroid CAS low borderline
Tpelscaffold_40071010 Steroid CAS medium pass
Tpelscaffold_40095940 Steroid CAS low borderline
Tpelscaffold_50110560 Steroid CAS medium pass
Tpelscaffold_50115560 Steroid CAS medium pass
Tpelscaffold_60145590 Steroid CAS medium pass
Tpelscaffold_90220020 Steroid CAS medium pass
Tpelscaffold_90220040 Steroid CAS medium pass
Tpelscaffold_90223270 Steroid CAS medium pass
Tpelscaffold_90227100 Steroid CAS medium pass
Tpelscaffold_10012110 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_160023020 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_20025230 Steroid CPD/CYP90A1 medium pass
Tpelscaffold_20027360 Steroid CPD/CYP90A1 low borderline
Tpelscaffold_20027390 Steroid CPD/CYP90A1 low borderline
Tpelscaffold_40070660 Steroid CPD/CYP90A1 low borderline
Tpelscaffold_40072210 Steroid CPD/CYP90A1 low borderline
Tpelscaffold_40090530 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_40092600 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_50105630 Steroid CPD/CYP90A1 low borderline
Tpelscaffold_50114480 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_60135090 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_80184220 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_90208880 Steroid CPD/CYP90A1 low borderline
Tpelscaffold_90213450 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_90222760 Steroid CPD/CYP90A1 medium borderline
Tpelscaffold_90223310 Steroid CPI1 high pass
Tpelscaffold_50123030 Steroid CYP51G1 medium borderline
Tpelscaffold_50127260 Steroid CYP51G1 medium borderline
Tpelscaffold_60144120 Steroid CYP51G1 medium borderline
Tpelscaffold_20044370 Steroid CYP90D1 low borderline
Tpelscaffold_40096450 Steroid CYP90D1 low borderline
Tpelscaffold_50127400 Steroid CYP90D1 low borderline
Tpelscaffold_70161690 Steroid CYP90D1 low borderline
Tpelscaffold_70167010 Steroid CYP90D1 low borderline
Tpelscaffold_90226010 Steroid CYP90D1 medium borderline
Tpelscaffold_60139370 Steroid DET2 low borderline
Tpelscaffold_60147460 Steroid DET2 low borderline
Tpelscaffold_80182730 Steroid DET2 low borderline
Tpelscaffold_90222650 Steroid DET2 medium pass
Tpelscaffold_30065510 Steroid DWF1 medium pass
Tpelscaffold_60143760 Steroid DWF1 medium pass
Tpelscaffold_10002140 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_10015350 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_10017470 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_10017520 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_20027370 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_30059710 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_30063550 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_30068300 Steroid DWF4/CYP90B1 low borderline