PlantSME Plant secondary metabolism enzyme database

Tetraphis pellucida (tetraphis_pellucida)

Imported from atlas release summary for Tetraphis pellucida.

693
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 178 10 POD (102) View species results
Terpenoid pathway 165 19 BAHD (61) View species results
Alkaloid pathway 140 19 7DLGT (33) View species results
Flavonoid pathway 102 8 UFGT (47) View species results
Rosmarinic acid pathway 68 7 C4H (27) View species results
Steroid pathway 40 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 650 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Tpelscaffold_40073230 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_40078780 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_40080070 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_40092960 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_40093830 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_40095080 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_40097870 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_50117070 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_60142650 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_60144140 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_60145050 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_60145490 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_60145530 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_60149810 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_70157850 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_80179380 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_80179390 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_80200300 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_90213460 Steroid DWF4/CYP90B1 medium borderline
Tpelscaffold_90219850 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_90219860 Steroid DWF4/CYP90B1 low borderline
Tpelscaffold_20024560 Steroid DWF5 low borderline
Tpelscaffold_40088880 Steroid DWF5 medium pass
Tpelscaffold_50115940 Steroid DWF5 low borderline
Tpelscaffold_60135710 Steroid DWF5 medium pass
Tpelscaffold_60143390 Steroid DWF5 medium borderline
Tpelscaffold_60146980 Steroid DWF5 medium pass
Tpelscaffold_70153570 Steroid DWF5 low borderline
Tpelscaffold_80193770 Steroid DWF5 low borderline
Tpelscaffold_60137070 Steroid DWF7 medium pass
Tpelscaffold_30063310 Steroid FK high pass
Tpelscaffold_70155890 Steroid HYD1 high pass
Tpelscaffold_70155910 Steroid HYD1 high pass
Tpelscaffold_70170610 Steroid HYD1 low borderline
Tpelscaffold_20044360 Steroid ROT3/CYP90C1 medium pass
Tpelscaffold_30059730 Steroid ROT3/CYP90C1 medium borderline
Tpelscaffold_40072880 Steroid ROT3/CYP90C1 medium borderline
Tpelscaffold_40093150 Steroid ROT3/CYP90C1 low borderline
Tpelscaffold_40093820 Steroid ROT3/CYP90C1 medium borderline
Tpelscaffold_40093840 Steroid ROT3/CYP90C1 medium pass
Tpelscaffold_60147000 Steroid ROT3/CYP90C1 low borderline
Tpelscaffold_70172370 Steroid ROT3/CYP90C1 medium borderline
Tpelscaffold_10000580 Steroid SMO1/SMO2 low borderline
Tpelscaffold_10005380 Steroid SMO1/SMO2 medium pass
Tpelscaffold_10005440 Steroid SMO1/SMO2 medium pass
Tpelscaffold_30055850 Steroid SMO1/SMO2 medium pass
Tpelscaffold_50126100 Steroid SMO1/SMO2 medium pass
Tpelscaffold_10005450 Steroid SMT1/SMT2/SMT3 medium pass
Tpelscaffold_20036550 Steroid SMT1/SMT2/SMT3 low borderline
Tpelscaffold_30062100 Steroid SMT1/SMT2/SMT3 low borderline