PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Catmscaffold14_pilon0016210 chlorokybus_atmophyticus Catmscaffold14_pilon0016210
Cacid2251030064220 chorisodontium_acidophyllum Cacid2251030064220
Cacid2260490069560 chorisodontium_acidophyllum Cacid2260490069560
Cacid2488730221870 chorisodontium_acidophyllum Cacid2488730221870
Cacid2490510223290 chorisodontium_acidophyllum Cacid2490510223290
Cacid2518210288480 chorisodontium_acidophyllum Cacid2518210288480
Cacipscaffold_1060004290 chorisodontium_aciphyllum Cacipscaffold_1060004290
Cacipscaffold_4940235590 chorisodontium_aciphyllum Cacipscaffold_4940235590
Cacipscaffold_6400333620 chorisodontium_aciphyllum Cacipscaffold_6400333620
Czof02G0002700.1 chromochloris_zofingiensis Czof02G0002700.1
Czof02G0002840.1 chromochloris_zofingiensis Czof02G0002840.1
Czof02G0002850.1 chromochloris_zofingiensis Czof02G0002850.1
Cnanutg28033_pilon_pilon0259950.1 chrysanthemum_nankingense Cnanutg28033_pilon_pilon0259950.1
Cnanutg8933_pilon_pilon0545060.1 chrysanthemum_nankingense Cnanutg8933_pilon_pilon0545060.1
CsetCse_sc012806.10667130 chrysanthemum_seticuspe CsetCse_sc012806.10667130
Cr_21148.1|Cr_LG_8:7595547-7597970|minus| cicer_reticulatum Cr_21148.1|Cr_LG_8:7595547-7597970|minus|
cinchona_pubescens_g10386.t1 cinchona_pubescens cinchona_pubescens_g10386.t1
cinnamomum_camphora_GWHPBGXC024157 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC024157
CkanCKAN.scaff00070185370.1 cinnamomum_kanehirae CkanCKAN.scaff00070185370.1
cissus_rotundifolia_CRGY0212505.1 cissus_rotundifolia cissus_rotundifolia_CRGY0212505.1
citrullus_lanatus_ClG42_07g0078400.10 citrullus_lanatus citrullus_lanatus_ClG42_07g0078400.10
citrus_australis_GWHPBQDX011911 citrus_australis citrus_australis_GWHPBQDX011911
citrus_australis_GWHPBQDX014273 citrus_australis citrus_australis_GWHPBQDX014273
Cclescaffold_30060010.1 citrus_clementina Cclescaffold_30060010.1
Cclescaffold_30060010.2 citrus_clementina Cclescaffold_30060010.2
Cclescaffold_70195450.1 citrus_clementina Cclescaffold_70195450.1
CIgra05G0002180.1 citrus_grandis CIgra05G0002180.1
CIgra07G0003110.1 citrus_grandis CIgra07G0003110.1
CIgraUnG0006180.1 citrus_grandis CIgraUnG0006180.1
Cichscaffold_600254380.1 citrus_ichangensis Cichscaffold_600254380.1