PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
cenchrus_fungigraminus_GWHPBWDX025159.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX025159.1
cenchrus_fungigraminus_GWHPBWDX030784.1 cenchrus_fungigraminus cenchrus_fungigraminus_GWHPBWDX030784.1
PenpuA30053376.g cenchrus_purpureus PenpuA30053376.g
PenpuB40072890.g cenchrus_purpureus PenpuB40072890.g
centella_asiatica_evm.model.Scaffold_1.3822 centella_asiatica centella_asiatica_evm.model.Scaffold_1.3822
centella_asiatica_evm.model.Scaffold_3469.1 centella_asiatica centella_asiatica_evm.model.Scaffold_3469.1
Cfolscaffold14490057410 cephalotus_follicularis Cfolscaffold14490057410
Cser05G0013610.1 cerasus_serrulata Cser05G0013610.1
Cser05G0013860.1 cerasus_serrulata Cser05G0013860.1
Cyed0A0G0031920 cerasus_yedoensis Cyed0A0G0031920
Cyed0A5G0016610 cerasus_yedoensis Cyed0A5G0016610
Ccanascaffold3|size25844690198400 cercis_canadensis Ccanascaffold3|size25844690198400
cercis_chinensis_GWHPBHAK017278 cercis_chinensis cercis_chinensis_GWHPBHAK017278
ceriops_zippeliana_evm.model.Scaffold_13_RagTag.144 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_13_RagTag.144
ceriops_zippeliana_evm.model.Scaffold_16_RagTag.122 ceriops_zippeliana ceriops_zippeliana_evm.model.Scaffold_16_RagTag.122
Cfasscaffold161_cov2260058560 chamaecrista_fasciculata Cfasscaffold161_cov2260058560
Cfasscaffold2634_cov2040118170 chamaecrista_fasciculata Cfasscaffold2634_cov2040118170
Cfasscaffold27690_cov1810123400 chamaecrista_fasciculata Cfasscaffold27690_cov1810123400
GBG86566 chara_braunii GBG86566
Cf007030.mRNA1 chenopodium_giganteum Cf007030.mRNA1
Cf032740.mRNA1 chenopodium_giganteum Cf032740.mRNA1
Cf059744.mRNA1 chenopodium_giganteum Cf059744.mRNA1
Cf059745.mRNA1 chenopodium_giganteum Cf059745.mRNA1
CquiC_Quinoa_Scaffold_12800051930.1 chenopodium_quinoa CquiC_Quinoa_Scaffold_12800051930.1
CquiC_Quinoa_Scaffold_14800072250.1 chenopodium_quinoa CquiC_Quinoa_Scaffold_14800072250.1
Calb2340109540.1 chiococca_alba Calb2340109540.1
Crei12G0004870.1 chlamydomonas_reinhardtii Crei12G0004870.1
jgi|Chlsc1|15088|g7336.t1 chlamydomonas_schloesseri jgi|Chlsc1|15088|g7336.t1
Cses03G0023860.1 chloranthus_sessilifolius Cses03G0023860.1
Cses07G0008760.1 chloranthus_sessilifolius Cses07G0008760.1