PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Ccri23g05500.1 carex_cristatella Ccri23g05500.1
Csco07g06490.1 carex_scoparia Csco07g06490.1
carica_papaya_GWHPBFSC010238 carica_papaya carica_papaya_GWHPBFSC010238
Cgig1_06648 carnegiea_gigantea Cgig1_06648
Cgig1_15213 carnegiea_gigantea Cgig1_15213
Cgig1_18231 carnegiea_gigantea Cgig1_18231
Cgig1_18232 carnegiea_gigantea Cgig1_18232
Cfan05G0003760.1 carpinus_fangiana Cfan05G0003760.1
Cfan05G0003790.1 carpinus_fangiana Cfan05G0003790.1
Cfan05G0003800.1 carpinus_fangiana Cfan05G0003800.1
Ctin02G0005370.1 carthamus_tinctorius Ctin02G0005370.1
Ctin03G0027420.1 carthamus_tinctorius Ctin03G0027420.1
Ctin04G0001100.2 carthamus_tinctorius Ctin04G0001100.2
Ccatscaffold192490076840 carya_cathayensis Ccatscaffold192490076840
Ccatscaffold262260138060 carya_cathayensis Ccatscaffold262260138060
carya_illinoinensis_Caril.11G126700.1.p carya_illinoinensis carya_illinoinensis_Caril.11G126700.1.p
carya_illinoinensis_Caril.12G086800.1.p carya_illinoinensis carya_illinoinensis_Caril.12G086800.1.p
castanea_dentata_Caden.10G145900.1.p castanea_dentata castanea_dentata_Caden.10G145900.1.p
Cmolctg00150026370.1 castanea_mollissima Cmolctg00150026370.1
castanopsis_hystrix_GWHPBWDD007302 castanopsis_hystrix castanopsis_hystrix_GWHPBWDD007302
casuarina_equisetifolia_CCG008065 casuarina_equisetifolia casuarina_equisetifolia_CCG008065
Cglascaffold1080010500 casuarina_glauca Cglascaffold1080010500
Cglascaffold1900069380 casuarina_glauca Cglascaffold1900069380
Cglascaffold2230080320 casuarina_glauca Cglascaffold2230080320
Cnit2000630039580 catagonium_nitens Cnit2000630039580
Cnit2587350195830 catagonium_nitens Cnit2587350195830
catharanthus_roseus_CRO_T013337 catharanthus_roseus catharanthus_roseus_CRO_T013337
Clenscf_80089080.1 caulerpa_lentillifera Clenscf_80089080.1
CEame03G0010010 cenchrus_americanus CEame03G0010010
CEame06G0000420 cenchrus_americanus CEame06G0000420