PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
CpluGWHAMMO000009620293630.1 calohypnum_plumiforme CpluGWHAMMO000009620293630.1
CpluGWHAMMO000010110299300.1 calohypnum_plumiforme CpluGWHAMMO000010110299300.1
Cgigscaffold_70182950 calotropis_gigantea Cgigscaffold_70182950
XP_010418436.1 camelina_sativa XP_010418436.1
XP_010430510.1 camelina_sativa XP_010430510.1
XP_010473642.1 camelina_sativa XP_010473642.1
XP_010495167.1 camelina_sativa XP_010495167.1
XP_019082763.1 camelina_sativa XP_019082763.1
camellia_oleifera_maker-HiC_scaffold_15-snap-gene-84.26-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_15-snap-gene-84.26-mRNA-1
camellia_sinensis_GWHPASIV006233 camellia_sinensis camellia_sinensis_GWHPASIV006233
camellia_sinensis_GWHPASIV006260 camellia_sinensis camellia_sinensis_GWHPASIV006260
camellia_sinensis_GWHPASIV020759 camellia_sinensis camellia_sinensis_GWHPASIV020759
camellia_sinensis_GWHPASIV033868 camellia_sinensis camellia_sinensis_GWHPASIV033868
camellia_sinensis_GWHPASIV042480 camellia_sinensis camellia_sinensis_GWHPASIV042480
Cacu01G0002580.1 camptotheca_acuminata Cacu01G0002580.1
capparis_spinosa_Cs12G003370.1 capparis_spinosa capparis_spinosa_Cs12G003370.1
CAgraScaffold620197120.1 capsella_grandiflora CAgraScaffold620197120.1
Crubscaffold_20047440.1 capsella_rubella Crubscaffold_20047440.1
Cann01G0002260.1 capsicum_annuum Cann01G0002260.1
CbacCBv1.2.scaffold1670104140.1 capsicum_baccatum CbacCBv1.2.scaffold1670104140.1
CbacCBv1.2.scaffold3820220880.1 capsicum_baccatum CbacCBv1.2.scaffold3820220880.1
CAchiCCv1.2.scaffold11020019080.1 capsicum_chinense CAchiCCv1.2.scaffold11020019080.1
CAchiCCv1.2.scaffold4490201810.1 capsicum_chinense CAchiCCv1.2.scaffold4490201810.1
cardamine_enshiensis_GWHPBHEU014870 cardamine_enshiensis cardamine_enshiensis_GWHPBHEU014870
cardamine_enshiensis_GWHPBHEU042039 cardamine_enshiensis cardamine_enshiensis_GWHPBHEU042039
cardamine_enshiensis_GWHPBHEU048639 cardamine_enshiensis cardamine_enshiensis_GWHPBHEU048639
Chir02G0000930.1 cardamine_hirsuta Chir02G0000930.1
Cresscaffold12293_size11080022150.1 cardamine_resedifolia Cresscaffold12293_size11080022150.1
Cresscaffold157_size2026270049430.1 cardamine_resedifolia Cresscaffold157_size2026270049430.1
Ccri02g05940.1 carex_cristatella Ccri02g05940.1