PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
bretschneidera_sinensis_BsiG0011013.1 bretschneidera_sinensis bretschneidera_sinensis_BsiG0011013.1
bretschneidera_sinensis_BsiG0035629.1 bretschneidera_sinensis bretschneidera_sinensis_BsiG0035629.1
bruguiera_cylindrica_evm.model.Scaffold_14_RagTag.132 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_14_RagTag.132
bruguiera_cylindrica_evm.model.Scaffold_16_RagTag.114 bruguiera_cylindrica bruguiera_cylindrica_evm.model.Scaffold_16_RagTag.114
bruguiera_parviflora_evm.model.Scaffold_14.135 bruguiera_parviflora bruguiera_parviflora_evm.model.Scaffold_14.135
bruguiera_parviflora_evm.model.Scaffold_16.114 bruguiera_parviflora bruguiera_parviflora_evm.model.Scaffold_16.114
bruguiera_sexangula_evm.model.Scaffold_14_RagTag.156 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_14_RagTag.156
bruguiera_sexangula_evm.model.Scaffold_16_RagTag.139 bruguiera_sexangula bruguiera_sexangula_evm.model.Scaffold_16_RagTag.139
Bnov862510240790 bryhnia_novae_angliae Bnov862510240790
Bill443920136860 bryoandersonia_illecebra Bill443920136860
Bnorscaffold_10011360 bryoxiphium_norvegicum Bnorscaffold_10011360
Bnorscaffold_130113090 bryoxiphium_norvegicum Bnorscaffold_130113090
Bknoscaffold_100053970 bryum_knowltonii Bknoscaffold_100053970
Bknoscaffold_110073430 bryum_knowltonii Bknoscaffold_110073430
Baphcontig_4290159530 buxbaumia_aphylla Baphcontig_4290159530
GWHPBHNJ007087 buxus_austroyunnanensis GWHPBHNJ007087
buxus_sinica_BUSI_003237-RA buxus_sinica buxus_sinica_BUSI_003237-RA
buxus_sinica_BUSI_003242-RA buxus_sinica buxus_sinica_BUSI_003242-RA
Ccaj06G0022140 cajanus_cajan Ccaj06G0022140
Csimscaffold18620157780 calamus_simplicifolius Csimscaffold18620157780
Csimscaffold23470217510 calamus_simplicifolius Csimscaffold23470217510
Csimscaffold9740506450 calamus_simplicifolius Csimscaffold9740506450
CAame03G0026360 callicarpa_americana CAame03G0026360
CAame10G0025700 callicarpa_americana CAame10G0025700
CAame10G0025710 callicarpa_americana CAame10G0025710
CAame10G0025720 callicarpa_americana CAame10G0025720
Ccor2639260309940 calliergon_cordifolium Ccor2639260309940
Ccusscaffold_40096070 calliergonella_cuspidata Ccusscaffold_40096070
Ccusscaffold_50142710 calliergonella_cuspidata Ccusscaffold_50142710
CpluGWHAMMO000002130085500.1 calohypnum_plumiforme CpluGWHAMMO000002130085500.1