PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
BhybBhD20190040.1 brachypodium_hybridum BhybBhD20190040.1
BhybBhD30262570.1 brachypodium_hybridum BhybBhD30262570.1
BhybBhS10377960.1 brachypodium_hybridum BhybBhS10377960.1
BhybBhS40531800.1 brachypodium_hybridum BhybBhS40531800.1
brachypodium_mexicanum_Brame.01UG498900.1.p brachypodium_mexicanum brachypodium_mexicanum_Brame.01UG498900.1.p
brachypodium_mexicanum_Brame.04PG305400.1.p brachypodium_mexicanum brachypodium_mexicanum_Brame.04PG305400.1.p
brachypodium_mexicanum_Brame.04UG281800.1.p brachypodium_mexicanum brachypodium_mexicanum_Brame.04UG281800.1.p
Blae2141700115790 brachythecium_laetum Blae2141700115790
Broe2141700115790 brachythecium_roeteanum Broe2141700115790
brasenia_schreberi_Brsc0052s4.t1 brasenia_schreberi brasenia_schreberi_Brsc0052s4.t1
brasenia_schreberi_Brsc0052s5.t1 brasenia_schreberi brasenia_schreberi_Brsc0052s5.t1
brasenia_schreberi_Brsc0559s036.t1 brasenia_schreberi brasenia_schreberi_Brsc0559s036.t1
brasenia_schreberi_Brsc14g1507.t2 brasenia_schreberi brasenia_schreberi_Brsc14g1507.t2
brasenia_schreberi_Brsc28g0296.t1 brasenia_schreberi brasenia_schreberi_Brsc28g0296.t1
brasenia_schreberi_Brsc35g0176.t3 brasenia_schreberi brasenia_schreberi_Brsc35g0176.t3
Bca_GomB04g06040.mRNA1 brassica_carinata Bca_GomB04g06040.mRNA1
Bca_GomB04g06310.mRNA1 brassica_carinata Bca_GomB04g06310.mRNA1
Bca_GomB04g40100.mRNA1 brassica_carinata Bca_GomB04g40100.mRNA1
Bca_GomC09g16700.mRNA1 brassica_carinata Bca_GomC09g16700.mRNA1
BjunA07G0002540 brassica_juncea BjunA07G0002540
BjunA09G0012790 brassica_juncea BjunA09G0012790
BjunB04G0015890 brassica_juncea BjunB04G0015890
BjunB04G0017520 brassica_juncea BjunB04G0017520
BnigB6G0020300.1 brassica_nigra BnigB6G0020300.1
BnigB6G0021420.1 brassica_nigra BnigB6G0021420.1
Bo4g096910.1 brassica_oleracea Bo4g096910.1
Bo9g030600.1 brassica_oleracea Bo9g030600.1
Bo9g033940.1 brassica_oleracea Bo9g033940.1
Bra027672.1-P brassica_rapa Bra027672.1-P
Bra027770.1-P brassica_rapa Bra027770.1-P