PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Bhis01G0017880.1 benincasa_hispida Bhis01G0017880.1
Bpatpat_scaffold13910061180.1 beta_patula Bpatpat_scaffold13910061180.1
Bpatpat_scaffold3140169640.1 beta_patula Bpatpat_scaffold3140169640.1
BEvul05G0024380.1 beta_vulgaris BEvul05G0024380.1
BpenContig1700081010.1 betula_pendula BpenContig1700081010.1
Bpusscaffold_30059270 blasia_pusilla Bpusscaffold_30059270
Boea_hygrometrica_lcl|KV007465.1_cds_KZV31533.1_27313 boea_hygrometrica Boea_hygrometrica_lcl|KV007465.1_cds_KZV31533.1_27313
Boea_hygrometrica_lcl|KV020134.1_cds_KZV15023.1_43773 boea_hygrometrica Boea_hygrometrica_lcl|KV020134.1_cds_KZV15023.1_43773
BOERETT00022728 boechera_retrofracta BOERETT00022728
BOERETT00048237 boechera_retrofracta BOERETT00048237
BOERETT00048240 boechera_retrofracta BOERETT00048240
BOERETT00048258 boechera_retrofracta BOERETT00048258
BOERETT00048408 boechera_retrofracta BOERETT00048408
BceiScaffold2200183680 bombax_ceiba BceiScaffold2200183680
BceiScaffold640445030 bombax_ceiba BceiScaffold640445030
BceiScaffold890513620 bombax_ceiba BceiScaffold890513620
BceiScaffold890513630 bombax_ceiba BceiScaffold890513630
BOampscaffold1610109550 bonia_amplexicaulis BOampscaffold1610109550
BOampscaffold2170176030 bonia_amplexicaulis BOampscaffold2170176030
BOampscaffold310250010 bonia_amplexicaulis BOampscaffold310250010
bothriochloa_decipiens_Bdec25063-RA bothriochloa_decipiens bothriochloa_decipiens_Bdec25063-RA
bothriochloa_decipiens_Bdec32366-RA bothriochloa_decipiens bothriochloa_decipiens_Bdec32366-RA
Bbrascaffold_120015930.1 botryococcus_braunii Bbrascaffold_120015930.1
bougainvillea_buttiana_Bou_136801 bougainvillea_buttiana bougainvillea_buttiana_Bou_136801
bougainvillea_buttiana_Bou_52387 bougainvillea_buttiana bougainvillea_buttiana_Bou_52387
bougainvillea_buttiana_Bou_9376 bougainvillea_buttiana bougainvillea_buttiana_Bou_9376
bougainvillea_buttiana_Bou_93978 bougainvillea_buttiana bougainvillea_buttiana_Bou_93978
Bdis02G0071400.1 brachypodium_distachyon Bdis02G0071400.1
Bdis03G0060350.1 brachypodium_distachyon Bdis03G0060350.1
Bdis03G0060350.2 brachypodium_distachyon Bdis03G0060350.2