PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Aturscaffold_100037250 aulacomnium_turgidum Aturscaffold_100037250
Aturscaffold_40154220 aulacomnium_turgidum Aturscaffold_40154220
Aprocontig_KL6620780000930.1 auxenochlorella_protothecoides Aprocontig_KL6620780000930.1
AatlScoFOjO_1760_23990135380.1 avena_atlantica AatlScoFOjO_1760_23990135380.1
AatlScoFOjO_1760_23990185630.1 avena_atlantica AatlScoFOjO_1760_23990185630.1
AatlScoFOjO_367_5040473690.1 avena_atlantica AatlScoFOjO_367_5040473690.1
AVeriSctCcfP_2331_44820239100.1 avena_eriantha AVeriSctCcfP_2331_44820239100.1
AVESA.00010b.r1.3CG0515950.1 avena_sativa AVESA.00010b.r1.3CG0515950.1
AVESA.00010b.r1.3DG0539460.1 avena_sativa AVESA.00010b.r1.3DG0539460.1
AVESA.00010b.r1.6AG1031110.1 avena_sativa AVESA.00010b.r1.6AG1031110.1
AVESA.00010b.r1.6CG1083610.1 avena_sativa AVESA.00010b.r1.6CG1083610.1
AVESA.00010b.r1.6DG1168700.1 avena_sativa AVESA.00010b.r1.6DG1168700.1
AVESA.00010b.r1.UnG1401350.1 avena_sativa AVESA.00010b.r1.UnG1401350.1
Acar07G0020120.1 averrhoa_carambola Acar07G0020120.1
avicennia_marina_AM_11147 avicennia_marina avicennia_marina_AM_11147
avicennia_marina_AM_13390 avicennia_marina avicennia_marina_AM_13390
AfilAzfi_s04680171700 azolla_filiculoides AfilAzfi_s04680171700
balanophora_subcupularis_BAL08924 balanophora_subcupularis balanophora_subcupularis_BAL08924
BAvulContig10410003870.1 barbarea_vulgaris BAvulContig10410003870.1
BAvulContig5090177350.1 barbarea_vulgaris BAvulContig5090177350.1
BAampscaffold_100018820 barbula_amplexifolia BAampscaffold_100018820
BAampscaffold_60180790 barbula_amplexifolia BAampscaffold_60180790
Bith2180105700 bartramia_ithyphylla Bith2180105700
Bathy18g01440 bathycoccus_prasinos Bathy18g01440
bauhinia_variegata_KAI4315461.1 bauhinia_variegata bauhinia_variegata_KAI4315461.1
bauhinia_variegata_KAI4326896.1 bauhinia_variegata bauhinia_variegata_KAI4326896.1
Btri1268490087290 bazzania_tridens Btri1268490087290
Bfucscaffold1012_cov1480001260 begonia_fuchsioides Bfucscaffold1012_cov1480001260
Bfucscaffold2339_cov1550184850 begonia_fuchsioides Bfucscaffold2339_cov1550184850
Bfucscaffold91817_cov1480492020 begonia_fuchsioides Bfucscaffold91817_cov1480492020