PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BhybBhD10019550.1 Alkaloid 16OMT medium borderline
BhybBhD10029440.1 Alkaloid 16OMT medium borderline
BhybBhD10062610.1 Alkaloid 16OMT medium borderline
BhybBhD10062640.1 Alkaloid 16OMT medium borderline
BhybBhD10077240.1 Alkaloid 16OMT medium borderline
BhybBhD20109960.1 Alkaloid 16OMT medium borderline
BhybBhD20134560.1 Alkaloid 16OMT medium borderline
BhybBhD20134590.1 Alkaloid 16OMT medium borderline
BhybBhD20134600.1 Alkaloid 16OMT medium borderline
BhybBhD20134610.1 Alkaloid 16OMT medium borderline
BhybBhD20134610.2 Alkaloid 16OMT medium borderline
BhybBhD20174010.1 Alkaloid 16OMT medium borderline
BhybBhD30214070.1 Alkaloid 16OMT medium borderline
BhybBhD30220850.1 Alkaloid 16OMT medium borderline
BhybBhD30242430.1 Alkaloid 16OMT medium borderline
BhybBhD30242440.1 Alkaloid 16OMT medium borderline
BhybBhD40301190.1 Alkaloid 16OMT medium borderline
BhybBhD40303090.1 Alkaloid 16OMT medium borderline
BhybBhD40303260.1 Alkaloid 16OMT medium borderline
BhybBhD40315350.1 Alkaloid 16OMT medium borderline
BhybBhD40315390.1 Alkaloid 16OMT medium borderline
BhybBhD40315390.2 Alkaloid 16OMT medium borderline
BhybBhD50371730.1 Alkaloid 16OMT medium borderline
BhybBhS100434340.1 Alkaloid 16OMT medium borderline
BhybBhS10392450.1 Alkaloid 16OMT medium borderline
BhybBhS10418210.1 Alkaloid 16OMT medium borderline
BhybBhS10418220.1 Alkaloid 16OMT medium borderline
BhybBhS30488750.1 Alkaloid 16OMT medium borderline
BhybBhS30513700.1 Alkaloid 16OMT medium borderline
BhybBhS50566380.1 Alkaloid 16OMT medium borderline
BhybBhS50566510.1 Alkaloid 16OMT medium borderline
BhybBhS50568790.1 Alkaloid 16OMT medium borderline
BhybBhS60597810.1 Alkaloid 16OMT medium borderline
BhybBhS60613720.1 Alkaloid 16OMT medium borderline
BhybBhS70624210.1 Alkaloid 16OMT medium borderline
BhybBhS80651390.1 Alkaloid 16OMT medium borderline
BhybBhS80651400.1 Alkaloid 16OMT medium borderline
BhybBhS80651410.1 Alkaloid 16OMT medium borderline
BhybBhS80651410.2 Alkaloid 16OMT medium borderline
BhybBhS90696400.1 Alkaloid 16OMT medium borderline
BhybBhD40303270.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
BhybBhS30495990.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
BhybBhS50566540.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
BhybBhD10005780.1 Alkaloid 7DLGT low borderline
BhybBhD10005790.1 Alkaloid 7DLGT low borderline
BhybBhD10005810.1 Alkaloid 7DLGT low borderline
BhybBhD10010210.1 Alkaloid 7DLGT medium pass
BhybBhD10010230.1 Alkaloid 7DLGT medium pass
BhybBhD10010240.1 Alkaloid 7DLGT medium pass
BhybBhD10010250.1 Alkaloid 7DLGT medium pass