PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
BhybBhD10003430.1 Steroid CYP90D1 low borderline
BhybBhD10014530.1 Steroid CYP90D1 low borderline
BhybBhD10019770.1 Steroid CYP90D1 medium borderline
BhybBhD10025240.1 Steroid CYP90D1 low borderline
BhybBhD10028980.1 Steroid CYP90D1 low borderline
BhybBhD10034000.1 Steroid CYP90D1 medium borderline
BhybBhD10048490.1 Steroid CYP90D1 low borderline
BhybBhD10051180.1 Steroid CYP90D1 low borderline
BhybBhD10087180.1 Steroid CYP90D1 low borderline
BhybBhD10087180.2 Steroid CYP90D1 low borderline
BhybBhD20113390.2 Steroid CYP90D1 low borderline
BhybBhD20115170.1 Steroid CYP90D1 medium borderline
BhybBhD20117250.1 Steroid CYP90D1 low borderline
BhybBhD20137290.1 Steroid CYP90D1 low borderline
BhybBhD20144630.1 Steroid CYP90D1 low borderline
BhybBhD20171880.1 Steroid CYP90D1 low borderline
BhybBhD30216930.1 Steroid CYP90D1 low borderline
BhybBhD30240060.1 Steroid CYP90D1 low borderline
BhybBhD30240080.1 Steroid CYP90D1 low borderline
BhybBhD30246890.1 Steroid CYP90D1 low borderline
BhybBhD30249040.1 Steroid CYP90D1 low borderline
BhybBhD30250260.1 Steroid CYP90D1 low borderline
BhybBhD40281580.1 Steroid CYP90D1 low borderline
BhybBhD40287420.1 Steroid CYP90D1 low borderline
BhybBhD40336820.1 Steroid CYP90D1 medium borderline
BhybBhD40338350.1 Steroid CYP90D1 low borderline
BhybBhD50356900.1 Steroid CYP90D1 medium borderline
BhybBhD50365170.1 Steroid CYP90D1 medium borderline
BhybBhS100428000.1 Steroid CYP90D1 low borderline
BhybBhS100428030.1 Steroid CYP90D1 low borderline
BhybBhS100428030.2 Steroid CYP90D1 low borderline
BhybBhS10394330.1 Steroid CYP90D1 low borderline
BhybBhS10411800.1 Steroid CYP90D1 low borderline
BhybBhS10413860.1 Steroid CYP90D1 medium borderline
BhybBhS10413860.2 Steroid CYP90D1 medium borderline
BhybBhS10415410.1 Steroid CYP90D1 low borderline
BhybBhS20449360.1 Steroid CYP90D1 low borderline
BhybBhS20461920.1 Steroid CYP90D1 low borderline
BhybBhS20468420.1 Steroid CYP90D1 medium borderline
BhybBhS20472800.1 Steroid CYP90D1 low borderline
BhybBhS20474270.1 Steroid CYP90D1 low borderline
BhybBhS30487150.1 Steroid CYP90D1 low borderline
BhybBhS30519310.1 Steroid CYP90D1 low borderline
BhybBhS30519310.2 Steroid CYP90D1 low borderline
BhybBhS50588240.1 Steroid CYP90D1 medium borderline
BhybBhS60594030.1 Steroid CYP90D1 low borderline
BhybBhS60602330.1 Steroid CYP90D1 medium borderline
BhybBhS70635600.1 Steroid CYP90D1 low borderline
BhybBhS70636590.1 Steroid CYP90D1 low borderline
BhybBhS80653690.1 Steroid CYP90D1 low borderline