PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
BhybBhD10044560.1 Alkaloid H6H low borderline
BhybBhD10051870.1 Alkaloid H6H low borderline
BhybBhD10061720.1 Alkaloid H6H low borderline
BhybBhD10063900.1 Alkaloid H6H medium pass
BhybBhD10063940.1 Alkaloid H6H medium pass
BhybBhD10063950.1 Alkaloid H6H low borderline
BhybBhD10081670.1 Alkaloid H6H low borderline
BhybBhD10089980.1 Alkaloid H6H medium borderline
BhybBhD10099190.1 Alkaloid H6H medium pass
BhybBhD20114630.2 Alkaloid H6H low borderline
BhybBhD20122930.1 Alkaloid H6H low borderline
BhybBhD20128680.1 Alkaloid H6H low borderline
BhybBhD20141560.1 Alkaloid H6H medium pass
BhybBhD20154810.1 Alkaloid H6H low borderline
BhybBhD20173320.1 Alkaloid H6H low borderline
BhybBhD20179120.1 Alkaloid H6H low borderline
BhybBhD20183050.1 Alkaloid H6H medium pass
BhybBhD20187230.1 Alkaloid H6H medium borderline
BhybBhD30233600.1 Alkaloid H6H low borderline
BhybBhD30233600.2 Alkaloid H6H low borderline
BhybBhD30239970.1 Alkaloid H6H low borderline
BhybBhD30239980.1 Alkaloid H6H low borderline
BhybBhD30243800.1 Alkaloid H6H medium pass
BhybBhD30248340.1 Alkaloid H6H low borderline
BhybBhD30250040.1 Alkaloid H6H medium pass
BhybBhD40276740.1 Alkaloid H6H low borderline
BhybBhD40291130.1 Alkaloid H6H low borderline
BhybBhD40337770.1 Alkaloid H6H medium borderline
BhybBhD50340730.1 Alkaloid H6H medium borderline
BhybBhD50346350.1 Alkaloid H6H medium borderline
BhybBhD50357370.1 Alkaloid H6H low borderline
BhybBhS100423700.1 Alkaloid H6H low borderline
BhybBhS100442000.1 Alkaloid H6H low borderline
BhybBhS10384220.1 Alkaloid H6H medium pass
BhybBhS10387740.1 Alkaloid H6H low borderline
BhybBhS10392220.1 Alkaloid H6H medium borderline
BhybBhS10393060.1 Alkaloid H6H low borderline
BhybBhS20451470.1 Alkaloid H6H medium pass
BhybBhS20459220.1 Alkaloid H6H medium borderline
BhybBhS20462660.1 Alkaloid H6H medium pass
BhybBhS20469050.1 Alkaloid H6H medium borderline
BhybBhS30506490.1 Alkaloid H6H low borderline
BhybBhS30511830.1 Alkaloid H6H low borderline
BhybBhS30511840.1 Alkaloid H6H low borderline
BhybBhS30514830.1 Alkaloid H6H low borderline
BhybBhS40524420.1 Alkaloid H6H medium borderline
BhybBhS50564800.1 Alkaloid H6H low borderline
BhybBhS50588970.1 Alkaloid H6H medium borderline
BhybBhS60617340.1 Alkaloid H6H low borderline
BhybBhS60617340.2 Alkaloid H6H low borderline