PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
BhybBhD10017430.1 Steroid CPD/CYP90A1 low borderline
BhybBhD10026170.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD10062290.1 Steroid CPD/CYP90A1 low borderline
BhybBhD10081810.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD10081820.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD10081830.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD10095680.1 Steroid CPD/CYP90A1 low borderline
BhybBhD20191110.1 Steroid CPD/CYP90A1 low borderline
BhybBhD30223530.1 Steroid CPD/CYP90A1 low borderline
BhybBhD30223530.2 Steroid CPD/CYP90A1 low borderline
BhybBhD30235280.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD40275230.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD40287480.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD40302310.1 Steroid CPD/CYP90A1 low borderline
BhybBhD40303070.1 Steroid CPD/CYP90A1 low borderline
BhybBhD40303070.2 Steroid CPD/CYP90A1 low borderline
BhybBhD40307490.1 Steroid CPD/CYP90A1 medium borderline
BhybBhD40307490.2 Steroid CPD/CYP90A1 medium borderline
BhybBhD40337190.1 Steroid CPD/CYP90A1 low borderline
BhybBhD50344780.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS100422580.1 Steroid CPD/CYP90A1 medium pass
BhybBhS10416900.1 Steroid CPD/CYP90A1 low borderline
BhybBhS20454690.1 Steroid CPD/CYP90A1 low borderline
BhybBhS30498260.1 Steroid CPD/CYP90A1 low borderline
BhybBhS30507830.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS40536760.1 Steroid CPD/CYP90A1 low borderline
BhybBhS50562540.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS50562540.2 Steroid CPD/CYP90A1 medium borderline
BhybBhS50562540.3 Steroid CPD/CYP90A1 medium borderline
BhybBhS50565810.1 Steroid CPD/CYP90A1 low borderline
BhybBhS50588420.1 Steroid CPD/CYP90A1 low borderline
BhybBhS60594920.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS60597420.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS60611810.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS60617430.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS70624430.1 Steroid CPD/CYP90A1 low borderline
BhybBhS80658140.1 Steroid CPD/CYP90A1 medium borderline
BhybBhS90672430.1 Steroid CPD/CYP90A1 medium borderline