PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BhybBhD10001800.1 Phenylpropanoid 4CL low borderline
BhybBhD10001800.2 Phenylpropanoid 4CL low borderline
BhybBhD10041410.1 Phenylpropanoid 4CL medium pass
BhybBhD10045940.1 Phenylpropanoid 4CL low borderline
BhybBhD10065320.1 Phenylpropanoid 4CL low borderline
BhybBhD10088810.1 Phenylpropanoid 4CL medium pass
BhybBhD10088810.2 Phenylpropanoid 4CL medium pass
BhybBhD10088820.1 Phenylpropanoid 4CL medium pass
BhybBhD10102060.1 Phenylpropanoid 4CL medium pass
BhybBhD10103740.1 Phenylpropanoid 4CL medium pass
BhybBhD10103750.1 Phenylpropanoid 4CL medium pass
BhybBhD10103760.1 Phenylpropanoid 4CL medium pass
BhybBhD10103770.1 Phenylpropanoid 4CL medium pass
BhybBhD10103870.1 Phenylpropanoid 4CL medium pass
BhybBhD10104130.1 Phenylpropanoid 4CL medium pass
BhybBhD20158230.1 Phenylpropanoid 4CL low borderline
BhybBhD20158230.2 Phenylpropanoid 4CL low borderline
BhybBhD20167350.1 Phenylpropanoid 4CL medium pass
BhybBhD20167790.1 Phenylpropanoid 4CL low borderline
BhybBhD20174620.1 Phenylpropanoid 4CL low borderline
BhybBhD20184240.1 Phenylpropanoid 4CL medium pass
BhybBhD30193090.1 Phenylpropanoid 4CL medium pass
BhybBhD30195710.1 Phenylpropanoid 4CL low borderline
BhybBhD30198710.1 Phenylpropanoid 4CL medium pass
BhybBhD30210850.1 Phenylpropanoid 4CL low borderline
BhybBhD30218440.1 Phenylpropanoid 4CL medium pass
BhybBhD30237980.1 Phenylpropanoid 4CL medium pass
BhybBhD30237980.2 Phenylpropanoid 4CL medium pass
BhybBhD30241980.1 Phenylpropanoid 4CL medium pass
BhybBhD30252860.1 Phenylpropanoid 4CL low borderline
BhybBhD30263410.1 Phenylpropanoid 4CL medium pass
BhybBhD40287170.1 Phenylpropanoid 4CL low borderline
BhybBhD40295780.1 Phenylpropanoid 4CL low borderline
BhybBhD40298510.1 Phenylpropanoid 4CL low borderline
BhybBhD40302990.1 Phenylpropanoid 4CL medium pass
BhybBhD40303020.1 Phenylpropanoid 4CL medium pass
BhybBhD40303020.2 Phenylpropanoid 4CL medium pass
BhybBhD40309800.1 Phenylpropanoid 4CL low borderline
BhybBhD40309800.2 Phenylpropanoid 4CL low borderline
BhybBhD40309800.3 Phenylpropanoid 4CL low borderline
BhybBhD40313150.1 Phenylpropanoid 4CL low borderline
BhybBhD40317660.1 Phenylpropanoid 4CL low borderline
BhybBhD40329200.1 Phenylpropanoid 4CL medium pass
BhybBhD40334560.1 Phenylpropanoid 4CL low borderline
BhybBhD40336600.1 Phenylpropanoid 4CL low borderline
BhybBhD40338680.1 Phenylpropanoid 4CL low borderline
BhybBhD50346740.1 Phenylpropanoid 4CL medium pass
BhybBhD50351040.1 Phenylpropanoid 4CL low borderline
BhybBhD50374650.1 Phenylpropanoid 4CL medium pass
BhybBhD50375570.1 Phenylpropanoid 4CL medium pass