PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status
BhybBhD10048920.1 Alkaloid NCS medium borderline
BhybBhD10048930.1 Alkaloid NCS medium borderline
BhybBhD10106870.1 Alkaloid NCS medium borderline
BhybBhD20114630.1 Alkaloid NCS medium borderline
BhybBhD20154110.1 Alkaloid NCS medium borderline
BhybBhD30235970.1 Alkaloid NCS medium borderline
BhybBhD30257990.1 Alkaloid NCS medium pass
BhybBhD40308400.1 Alkaloid NCS medium borderline
BhybBhD50366770.1 Alkaloid NCS medium pass
BhybBhD50371690.1 Alkaloid NCS medium borderline
BhybBhD50373910.1 Alkaloid NCS medium borderline
BhybBhS10414260.1 Alkaloid NCS medium borderline
BhybBhS20444530.1 Alkaloid NCS medium borderline
BhybBhS30508460.1 Alkaloid NCS medium borderline
BhybBhS40523570.1 Alkaloid NCS low borderline
BhybBhS40535910.1 Alkaloid NCS medium pass
BhybBhS40538590.1 Alkaloid NCS low borderline
BhybBhS50561700.1 Alkaloid NCS medium borderline
BhybBhS50588660.1 Alkaloid NCS medium borderline
BhybBhS70636210.1 Alkaloid NCS medium borderline
BhybBhS80667420.1 Alkaloid NCS medium borderline
BhybBhS90676460.1 Alkaloid NCS medium borderline
BhybBhS90684270.1 Alkaloid NCS medium borderline
BhybBhS90691900.1 Alkaloid NCS medium pass
BhybBhS90696360.1 Alkaloid NCS medium borderline
BhybBhS90698210.1 Alkaloid NCS medium borderline