PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
BhybBhD20153790.1 Flavonoid PAL low borderline
BhybBhD30256190.1 Flavonoid PAL medium pass
BhybBhD30258690.1 Flavonoid PAL high pass
BhybBhD30259230.1 Flavonoid PAL high pass
BhybBhD30259250.1 Flavonoid PAL high pass
BhybBhD30259260.1 Flavonoid PAL high pass
BhybBhD30259270.1 Flavonoid PAL high pass
BhybBhD50361130.1 Flavonoid PAL high pass
BhybBhS40534710.1 Flavonoid PAL high pass
BhybBhS40534720.1 Flavonoid PAL high pass
BhybBhS40534730.1 Flavonoid PAL high pass
BhybBhS40534740.1 Flavonoid PAL high pass
BhybBhS40535220.1 Flavonoid PAL high pass
BhybBhS40537520.1 Flavonoid PAL high pass
BhybBhS80667230.1 Flavonoid PAL low borderline
BhybBhS90687040.1 Flavonoid PAL high pass
BhybBhD20153790.1 Phenylpropanoid PAL low borderline
BhybBhD30256190.1 Phenylpropanoid PAL medium pass
BhybBhD30258690.1 Phenylpropanoid PAL high pass
BhybBhD30259230.1 Phenylpropanoid PAL high pass
BhybBhD30259250.1 Phenylpropanoid PAL high pass
BhybBhD30259260.1 Phenylpropanoid PAL high pass
BhybBhD30259270.1 Phenylpropanoid PAL high pass
BhybBhD50361130.1 Phenylpropanoid PAL high pass
BhybBhS40534710.1 Phenylpropanoid PAL high pass
BhybBhS40534720.1 Phenylpropanoid PAL high pass
BhybBhS40534730.1 Phenylpropanoid PAL high pass
BhybBhS40534740.1 Phenylpropanoid PAL high pass
BhybBhS40535220.1 Phenylpropanoid PAL high pass
BhybBhS40537520.1 Phenylpropanoid PAL high pass
BhybBhS80667230.1 Phenylpropanoid PAL low borderline
BhybBhS90687040.1 Phenylpropanoid PAL high pass
BhybBhD20153790.1 Rosmarinic Acid PAL low borderline
BhybBhD30256190.1 Rosmarinic Acid PAL medium pass
BhybBhD30258690.1 Rosmarinic Acid PAL high pass
BhybBhD30259230.1 Rosmarinic Acid PAL high pass
BhybBhD30259250.1 Rosmarinic Acid PAL high pass
BhybBhD30259260.1 Rosmarinic Acid PAL high pass
BhybBhD30259270.1 Rosmarinic Acid PAL high pass
BhybBhD50361130.1 Rosmarinic Acid PAL high pass
BhybBhS40534710.1 Rosmarinic Acid PAL high pass
BhybBhS40534720.1 Rosmarinic Acid PAL high pass
BhybBhS40534730.1 Rosmarinic Acid PAL high pass
BhybBhS40534740.1 Rosmarinic Acid PAL high pass
BhybBhS40535220.1 Rosmarinic Acid PAL high pass
BhybBhS40537520.1 Rosmarinic Acid PAL high pass
BhybBhS80667230.1 Rosmarinic Acid PAL low borderline
BhybBhS90687040.1 Rosmarinic Acid PAL high pass