PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
BhybBhD10048120.1 Flavonoid DFR medium borderline
BhybBhD10048130.1 Flavonoid DFR medium borderline
BhybBhD20123070.1 Flavonoid DFR medium borderline
BhybBhD20126040.1 Flavonoid DFR medium borderline
BhybBhD20178930.1 Flavonoid DFR medium borderline
BhybBhD30199110.1 Flavonoid DFR medium borderline
BhybBhD30246280.1 Flavonoid DFR medium borderline
BhybBhD30266880.1 Flavonoid DFR medium borderline
BhybBhD30266880.2 Flavonoid DFR medium pass
BhybBhD30266900.1 Flavonoid DFR medium pass
BhybBhD30266910.1 Flavonoid DFR medium borderline
BhybBhD30266910.2 Flavonoid DFR medium borderline
BhybBhD40286910.1 Flavonoid DFR medium borderline
BhybBhD40296880.1 Flavonoid DFR low borderline
BhybBhD40296880.2 Flavonoid DFR low borderline
BhybBhD40323900.1 Flavonoid DFR medium borderline
BhybBhD40324050.1 Flavonoid DFR medium borderline
BhybBhS100433570.1 Flavonoid DFR medium borderline
BhybBhS100437640.1 Flavonoid DFR low borderline
BhybBhS10387890.1 Flavonoid DFR medium borderline
BhybBhS10404030.1 Flavonoid DFR medium borderline
BhybBhS30498090.1 Flavonoid DFR low borderline
BhybBhS30498090.2 Flavonoid DFR low borderline
BhybBhS30498090.3 Flavonoid DFR low borderline
BhybBhS30517030.1 Flavonoid DFR medium borderline
BhybBhS40527680.1 Flavonoid DFR medium borderline
BhybBhS40527690.1 Flavonoid DFR medium borderline
BhybBhS40550660.1 Flavonoid DFR medium borderline
BhybBhS40550660.2 Flavonoid DFR medium borderline
BhybBhS50561020.1 Flavonoid DFR low borderline
BhybBhS50576280.1 Flavonoid DFR medium borderline
BhybBhS50576460.1 Flavonoid DFR medium pass
BhybBhS70636930.1 Flavonoid DFR medium borderline
BhybBhS70636930.2 Flavonoid DFR medium borderline
BhybBhS70636970.1 Flavonoid DFR medium borderline
BhybBhS70636980.1 Flavonoid DFR medium borderline
BhybBhS70636980.2 Flavonoid DFR medium borderline
BhybBhS70642850.1 Flavonoid DFR medium borderline