PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
BhybBhD10106760.1 Alkaloid GS low borderline
BhybBhD20148300.1 Alkaloid GS low borderline
BhybBhD20173970.2 Alkaloid GS low borderline
BhybBhD30199720.1 Alkaloid GS high pass
BhybBhD30209380.1 Alkaloid GS medium pass
BhybBhD30216650.1 Alkaloid GS high pass
BhybBhD30224150.1 Alkaloid GS high pass
BhybBhD30238720.1 Alkaloid GS low borderline
BhybBhD30248890.1 Alkaloid GS medium pass
BhybBhD30255310.1 Alkaloid GS low borderline
BhybBhD30255310.2 Alkaloid GS low borderline
BhybBhD30266510.1 Alkaloid GS low borderline
BhybBhD40318150.1 Alkaloid GS high pass
BhybBhD40318160.1 Alkaloid GS high pass
BhybBhD40324600.1 Alkaloid GS low borderline
BhybBhD40324610.1 Alkaloid GS low borderline
BhybBhD50346310.1 Alkaloid GS high pass
BhybBhD50348470.1 Alkaloid GS low borderline
BhybBhD50368790.1 Alkaloid GS high pass
BhybBhS10392490.1 Alkaloid GS low borderline
BhybBhS20444650.1 Alkaloid GS low borderline
BhybBhS30487250.1 Alkaloid GS high pass
BhybBhS30492430.1 Alkaloid GS medium pass
BhybBhS30498840.1 Alkaloid GS high pass
BhybBhS30510620.1 Alkaloid GS low borderline
BhybBhS30519150.1 Alkaloid GS medium pass
BhybBhS40528060.1 Alkaloid GS low borderline
BhybBhS40538330.1 Alkaloid GS low borderline
BhybBhS40550110.1 Alkaloid GS high pass
BhybBhS50571160.1 Alkaloid GS high pass
BhybBhS50571170.1 Alkaloid GS high pass
BhybBhS50574250.1 Alkaloid GS low borderline
BhybBhS50574260.1 Alkaloid GS low borderline
BhybBhS50576930.1 Alkaloid GS low borderline
BhybBhS50576940.1 Alkaloid GS low borderline
BhybBhS80662790.1 Alkaloid GS low borderline
BhybBhS90676440.1 Alkaloid GS high pass
BhybBhS90676760.1 Alkaloid GS low borderline
BhybBhS90676760.2 Alkaloid GS low borderline
BhybBhS90676800.1 Alkaloid GS low borderline
BhybBhS90693560.1 Alkaloid GS high pass