PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
BhybBhD10002870.1 Alkaloid IO medium borderline
BhybBhD10020700.1 Alkaloid IO medium pass
BhybBhD10102680.1 Alkaloid IO medium borderline
BhybBhD20134690.1 Alkaloid IO medium borderline
BhybBhD20148480.1 Alkaloid IO medium borderline
BhybBhD20171880.1 Alkaloid IO medium borderline
BhybBhD30192320.1 Alkaloid IO low borderline
BhybBhD30202710.1 Alkaloid IO medium borderline
BhybBhD30217160.1 Alkaloid IO medium borderline
BhybBhD30226180.1 Alkaloid IO medium borderline
BhybBhD30232600.1 Alkaloid IO medium borderline
BhybBhD30249040.1 Alkaloid IO medium borderline
BhybBhD40279430.1 Alkaloid IO medium borderline
BhybBhD40287530.1 Alkaloid IO medium borderline
BhybBhD40326650.1 Alkaloid IO medium borderline
BhybBhD50340900.1 Alkaloid IO medium pass
BhybBhD50351420.1 Alkaloid IO medium borderline
BhybBhS10385800.1 Alkaloid IO medium borderline
BhybBhS20448480.1 Alkaloid IO medium borderline
BhybBhS20467490.1 Alkaloid IO medium pass
BhybBhS20484330.1 Alkaloid IO medium borderline
BhybBhS30491140.1 Alkaloid IO medium borderline
BhybBhS30519310.1 Alkaloid IO medium borderline
BhybBhS30519310.2 Alkaloid IO medium borderline
BhybBhS40547670.1 Alkaloid IO medium borderline
BhybBhS40556680.1 Alkaloid IO low borderline
BhybBhS50562540.1 Alkaloid IO low borderline
BhybBhS50583560.1 Alkaloid IO medium pass
BhybBhS50583570.1 Alkaloid IO medium pass
BhybBhS70635150.1 Alkaloid IO medium borderline
BhybBhS70635620.1 Alkaloid IO medium borderline
BhybBhS80651450.1 Alkaloid IO medium borderline
BhybBhS80662940.1 Alkaloid IO medium borderline
BhybBhS90672970.1 Alkaloid IO medium pass
BhybBhS90674180.1 Alkaloid IO medium borderline
BhybBhS90679200.1 Alkaloid IO medium borderline