PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
Reset
Gene Pathway Family Confidence Status Best Target
BhybBhD20147080.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BhybBhD20172580.1 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
BhybBhD30218270.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
BhybBhD30222300.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
BhybBhD40329500.1 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
BhybBhD50372500.1 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
BhybBhS10393650.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
BhybBhS10393650.2 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
BhybBhS30493760.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
BhybBhS30497240.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
BhybBhS50581010.1 Rosmarinic Acid CPR medium pass CPR__00005__sp_Q653S9_NCPR3_ORYSJ
BhybBhS80661830.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
BhybBhS90697120.1 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ