PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
citrus_limon_GWHPCBFQ027827.1 citrus_limon citrus_limon_GWHPCBFQ027827.1
citrus_limon_GWHPCBFQ033186.1 citrus_limon citrus_limon_GWHPCBFQ033186.1
Cmedscaffold_420203800.1 citrus_medica Cmedscaffold_420203800.1
Cretscaffold86035_cov920242990.1 citrus_reticulata Cretscaffold86035_cov920242990.1
Csinscaffold000090044980.1 citrus_sinensis Csinscaffold000090044980.1
Csinscaffold000090044980.2 citrus_sinensis Csinscaffold000090044980.2
Csinscaffold005300201370.1 citrus_sinensis Csinscaffold005300201370.1
CLchi01G0013070.1 cladopus_chinensis CLchi01G0013070.1
CLchi08G0006960.1 cladopus_chinensis CLchi08G0006960.1
CLchiGWHACFD000001040002910.1 cladopus_chinensis CLchiGWHACFD000001040002910.1
CLchiGWHACFD000002440012120.1 cladopus_chinensis CLchiGWHACFD000002440012120.1
CsonA1G0033790.1 cleistogenes_songorica CsonA1G0033790.1
CsonB1G0029860.1 cleistogenes_songorica CsonB1G0029860.1
Carb948600099330.1 clethra_arborea Carb948600099330.1
CLame659440070360 climacium_americanum CLame659440070360
CLame659440070380 climacium_americanum CLame659440070380
CLame669000232330 climacium_americanum CLame669000232330
Cnucscaffold46400189660 cocos_nucifera Cnucscaffold46400189660
Cnucscaffold6550230770 cocos_nucifera Cnucscaffold6550230770
codonopsis_lanceolata_Cl_chr03_51880T codonopsis_lanceolata codonopsis_lanceolata_Cl_chr03_51880T
Ccane08G0015230.1 coffea_canephora Ccane08G0015230.1
coix_lacryma-jobi_GWHPAAYR060809 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR060809
colocasia_esculenta_EVM0027433.1 colocasia_esculenta colocasia_esculenta_EVM0027433.1
Cconscaffold_70154140 conocephalum_conicum Cconscaffold_70154140
Ccapcontig103960127090.1 corchorus_capsularis Ccapcontig103960127090.1
COsat01G0002930.1 coriandrum_sativum COsat01G0002930.1
coriaria_nepalensis_Conep06aG0083400.1 coriaria_nepalensis coriaria_nepalensis_Conep06aG0083400.1
coriaria_nepalensis_Conep06bG0083700.1 coriaria_nepalensis coriaria_nepalensis_Conep06bG0083700.1
coriaria_nepalensis_Conep09aG0082700.1 coriaria_nepalensis coriaria_nepalensis_Conep09aG0082700.1
coriaria_nepalensis_Conep09bG0081100.1 coriaria_nepalensis coriaria_nepalensis_Conep09bG0081100.1