PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Fant1812980156780.1 fontinalis_antipyretica Fant1812980156780.1
Fant406310162370.1 fontinalis_antipyretica Fant406310162370.1
Fant945840165170.1 fontinalis_antipyretica Fant945840165170.1
Fsul2824850197590 fontinalis_sullivantii Fsul2824850197590
fortunella_hindsii_sjg138510.1 fortunella_hindsii fortunella_hindsii_sjg138510.1
fortunella_hindsii_sjg221900.1 fortunella_hindsii fortunella_hindsii_sjg221900.1
fortunella_hindsii_sjg297400.1 fortunella_hindsii fortunella_hindsii_sjg297400.1
fortunella_hindsii_sjg306600.1 fortunella_hindsii fortunella_hindsii_sjg306600.1
Fossombronia2360148660 fossombronia Fossombronia2360148660
Fossombronia5720224400 fossombronia Fossombronia5720224400
FanaFAN_r2.3ch00206140 fragaria_ananassa FanaFAN_r2.3ch00206140
FanaFAN_r2.3ch00209500 fragaria_ananassa FanaFAN_r2.3ch00209500
FanaFAN_r2.3ch5Avb1086240 fragaria_ananassa FanaFAN_r2.3ch5Avb1086240
FanaFAN_r2.3ch5Bia1126020 fragaria_ananassa FanaFAN_r2.3ch5Bia1126020
FanaFAN_r2.3ch5Bib1153000 fragaria_ananassa FanaFAN_r2.3ch5Bib1153000
FanaFAN_r2.3ch5X2a1228310 fragaria_ananassa FanaFAN_r2.3ch5X2a1228310
FanaFAN_r2.3ch5X2b1237670 fragaria_ananassa FanaFAN_r2.3ch5X2b1237670
fragaria_chiloensis_maker-5A-augustus-gene-17.176-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-5A-augustus-gene-17.176-mRNA-1
fragaria_chiloensis_maker-5B-augustus-gene-270.111-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-5B-augustus-gene-270.111-mRNA-1
fragaria_chiloensis_maker-5C-augustus-gene-20.12-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-5C-augustus-gene-20.12-mRNA-1
fragaria_chiloensis_maker-5D-augustus-gene-16.128-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-5D-augustus-gene-16.128-mRNA-1
fragaria_iinumae_evm.model.scaf_66.262 fragaria_iinumae fragaria_iinumae_evm.model.scaf_66.262
fragaria_mandshurica_evm.model.chr5.308 fragaria_mandshurica fragaria_mandshurica_evm.model.chr5.308
FnilGWHABKC000000050181760.1 fragaria_nilgerrensis FnilGWHABKC000000050181760.1
fragaria_nipponica_maker-chr5-augustus-gene-343.31-mRNA-1 fragaria_nipponica fragaria_nipponica_maker-chr5-augustus-gene-343.31-mRNA-1
fragaria_nubicola_evm.model.ctg151.104 fragaria_nubicola fragaria_nubicola_evm.model.ctg151.104
Fves05G0003860.1 fragaria_vesca Fves05G0003860.1
fragaria_x_ananassa_maker-Fvb5-1-snap-gene-18.35-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb5-1-snap-gene-18.35-mRNA-1
fragaria_x_ananassa_maker-Fvb5-2-augustus-gene-16.40-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb5-2-augustus-gene-16.40-mRNA-1
fragaria_x_ananassa_maker-Fvb5-3-augustus-gene-256.35-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb5-3-augustus-gene-256.35-mRNA-1