PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
fragaria_x_ananassa_maker-Fvb5-4-augustus-gene-16.50-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb5-4-augustus-gene-16.50-mRNA-1
FexcContig39400208150.1 fraxinus_excelsior FexcContig39400208150.1
fraxinus_pennsylvanica_Fp_g28367 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g28367
fraxinus_pennsylvanica_Fp_g9621 fraxinus_pennsylvanica fraxinus_pennsylvanica_Fp_g9621
Fmon4074270204860 frullania_moniliata Fmon4074270204860
Fmon4074810210390 frullania_moniliata Fmon4074810210390
Fhygscaffold_240238940 funaria_hygrometrica Fhygscaffold_240238940
Gsulscaf_00000190.1 galdieria_sulphuraria Gsulscaf_00000190.1
GelaGWHAAEX000002330177380.1 gastrodia_elata GelaGWHAAEX000002330177380.1
gastrodia_menghaiensis_evm.model.scaffold_111.86 gastrodia_menghaiensis gastrodia_menghaiensis_evm.model.scaffold_111.86
gastrodia_menghaiensis_evm.model.scaffold_197.25 gastrodia_menghaiensis gastrodia_menghaiensis_evm.model.scaffold_197.25
Gtri04G0010960 gilleni_trifoliata Gtri04G0010960
Gt00035874 gillenia_trifoliata Gt00035874
Gbil06G0002620.1 ginkgo_biloba Gbil06G0002620.1
glebionis_coronaria_Gcor.h2tg000567l.g609.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg000567l.g609.t1
glebionis_coronaria_Gcor.h2tg005104l.g1102.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg005104l.g1102.t1
Gmax11G0002090.1 glycine_max Gmax11G0002090.1
Gsoj11G0002010.1 glycine_soja Gsoj11G0002010.1
Gmon15G0000700 gnetum_montanum Gmon15G0000700
GmonSuper-Scaffold_496:::fragment_30008930 gnetum_montanum GmonSuper-Scaffold_496:::fragment_30008930
Gmonoriginal_scaffold_947290027960 gnetum_montanum Gmonoriginal_scaffold_947290027960
Gphi378450064240 gollania_philippinensis Gphi378450064240
gossypium_anomalum_Gano_02G009970.1 gossypium_anomalum gossypium_anomalum_Gano_02G009970.1
gossypium_anomalum_Gano_08G015790.1 gossypium_anomalum gossypium_anomalum_Gano_08G015790.1
Garb02G0000100 gossypium_arboreum Garb02G0000100
Garb03G0002900 gossypium_arboreum Garb03G0002900
GbarA02G0011810 gossypium_barbadense GbarA02G0011810
GbarA06G0005160 gossypium_barbadense GbarA06G0005160
GbarA08G0013560 gossypium_barbadense GbarA08G0013560
GbarD03G0008820 gossypium_barbadense GbarD03G0008820