PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
GbarD08G0013770 gossypium_barbadense GbarD08G0013770
gossypium_bickii_Gbic_02G010880.1 gossypium_bickii gossypium_bickii_Gbic_02G010880.1
gossypium_bickii_Gbic_08G013440.1 gossypium_bickii gossypium_bickii_Gbic_08G013440.1
Gher02G0012030.1 gossypium_herbaceum Gher02G0012030.1
Gher02G0018240.1 gossypium_herbaceum Gher02G0018240.1
Gher08G0015590.1 gossypium_herbaceum Gher08G0015590.1
GhirA02G0011850.1 gossypium_hirsutum GhirA02G0011850.1
GhirA08G0013120.1 gossypium_hirsutum GhirA08G0013120.1
GhirA08G0013130.1 gossypium_hirsutum GhirA08G0013130.1
GhirD03G0009140.1 gossypium_hirsutum GhirD03G0009140.1
GhirD08G0014350.1 gossypium_hirsutum GhirD08G0014350.1
GhirD08G0014350.2 gossypium_hirsutum GhirD08G0014350.2
GhirD08G0014350.3 gossypium_hirsutum GhirD08G0014350.3
gossypium_longicalyx_Glon_02G011830.1 gossypium_longicalyx gossypium_longicalyx_Glon_02G011830.1
gossypium_longicalyx_Glon_08G016490.1 gossypium_longicalyx gossypium_longicalyx_Glon_08G016490.1
GmusA02G0011810.1 gossypium_mustelinum GmusA02G0011810.1
GmusD03G0008850.1 gossypium_mustelinum GmusD03G0008850.1
GmusD08G0014350.1 gossypium_mustelinum GmusD08G0014350.1
GmusD08G0014350.2 gossypium_mustelinum GmusD08G0014350.2
GmusD08G0014350.3 gossypium_mustelinum GmusD08G0014350.3
GmusD08G0014350.4 gossypium_mustelinum GmusD08G0014350.4
Grai03G0008580.1 gossypium_raimondii Grai03G0008580.1
Grai03G0008580.2 gossypium_raimondii Grai03G0008580.2
Grai03G0008580.3 gossypium_raimondii Grai03G0008580.3
Grai03G0008580.4 gossypium_raimondii Grai03G0008580.4
Grai03G0008580.5 gossypium_raimondii Grai03G0008580.5
Grai04G0013780.1 gossypium_raimondii Grai04G0013780.1
Grai04G0013780.2 gossypium_raimondii Grai04G0013780.2
gossypium_rotundifolium_Grot_02G010190.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_02G010190.1
gossypium_rotundifolium_Grot_08G015480.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_08G015480.1