PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
gossypium_stocksii_Gsto_02G010220.1 gossypium_stocksii gossypium_stocksii_Gsto_02G010220.1
gossypium_stocksii_Gsto_08G016070.1 gossypium_stocksii gossypium_stocksii_Gsto_08G016070.1
gossypium_sturtianum_Gstu02G012300 gossypium_sturtianum gossypium_sturtianum_Gstu02G012300
gossypium_sturtianum_Gstu08G017070 gossypium_sturtianum gossypium_sturtianum_Gstu08G017070
GtomA02G0012700.1 gossypium_tomentosum GtomA02G0012700.1
GtomA08G0013530.1 gossypium_tomentosum GtomA08G0013530.1
GtomD03G0009830.1 gossypium_tomentosum GtomD03G0009830.1
GtomD03G0009830.2 gossypium_tomentosum GtomD03G0009830.2
GtomD03G0009830.3 gossypium_tomentosum GtomD03G0009830.3
GtomD08G0014810.1 gossypium_tomentosum GtomD08G0014810.1
GtomD08G0014810.2 gossypium_tomentosum GtomD08G0014810.2
GtomD08G0014810.3 gossypium_tomentosum GtomD08G0014810.3
GtomD08G0014810.4 gossypium_tomentosum GtomD08G0014810.4
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g038480.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g038480.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g038490.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g038490.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.08g221770.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.08g221770.m01.polypeptide
GobtHiC_scaffold_30140580 grimmia_obtusifolia GobtHiC_scaffold_30140580
GobtHiC_scaffold_70225680 grimmia_obtusifolia GobtHiC_scaffold_70225680
gynandropsis_gynandra_Gyn_10X_HIC_v5_00002363.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00002363.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00003846.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00003846.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00006806.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00006806.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00007580.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00007580.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00020831.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00020831.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00027347.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00027347.mRNA1
gypsophila_paniculata_Gpan05g00850.m1 gypsophila_paniculata gypsophila_paniculata_Gpan05g00850.m1
haloxylon_ammodendron_SS05569.t1 haloxylon_ammodendron haloxylon_ammodendron_SS05569.t1
HimpHimp2_scaffold_45020176060.1 handroanthus_impetiginosus HimpHimp2_scaffold_45020176060.1
Haplomitrium10965380119310 haplomitrium Haplomitrium10965380119310
Hcilscaffold_40098410 hedwigia_ciliata Hcilscaffold_40098410
Hann03G0023440.1 helianthus_annuus Hann03G0023440.1