PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
heliophila_variabilis_HV01G016330 heliophila_variabilis heliophila_variabilis_HV01G016330
HhamSuperscaffold220374560 hibiscus_hamabo HhamSuperscaffold220374560
HhamSuperscaffold340654390 hibiscus_hamabo HhamSuperscaffold340654390
HhamSuperscaffold380718840 hibiscus_hamabo HhamSuperscaffold380718840
HhamSuperscaffold400798760 hibiscus_hamabo HhamSuperscaffold400798760
HhamSuperscaffold70978030 hibiscus_hamabo HhamSuperscaffold70978030
HhamSuperscaffold70981290 hibiscus_hamabo HhamSuperscaffold70981290
hippophae_rhamnoides_Hiprha1gene06447 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene06447
hippophae_rhamnoides_Hiprha1gene23244 hippophae_rhamnoides hippophae_rhamnoides_Hiprha1gene23244
hirschfeldia_incana_HINC_NIJ_V1_G0018580.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0018580.1
hirschfeldia_incana_HINC_NIJ_V1_G0019410.1 hirschfeldia_incana hirschfeldia_incana_HINC_NIJ_V1_G0019410.1
Hsca1370025440 homaliodendron_scalpellifolium Hsca1370025440
hordeum_marinum_GWHPBJBH045491 hordeum_marinum hordeum_marinum_GWHPBJBH045491
hordeum_marinum_GWHPBJBH059125 hordeum_marinum hordeum_marinum_GWHPBJBH059125
Hvulchr6HG0029420.1 hordeum_vulgare Hvulchr6HG0029420.1
Hvulchr6HG0029420.2 hordeum_vulgare Hvulchr6HG0029420.2
HvulchrUnG0012470.1 hordeum_vulgare HvulchrUnG0012470.1
Hlup001079F0325530.1 humulus_lupulus Hlup001079F0325530.1
Hlup001734F0442560.1 humulus_lupulus Hlup001734F0442560.1
Hlup003317F0628550.1 humulus_lupulus Hlup003317F0628550.1
hydrangea_macrophylla_Hma1.2p1_0377F.1_g139550 hydrangea_macrophylla hydrangea_macrophylla_Hma1.2p1_0377F.1_g139550
HvarHygva1547240087840 hygroamblystegium_varium HvarHygva1547240087840
HvarHygva24440336870 hygroamblystegium_varium HvarHygva24440336870
Hlur1305670006290 hygrohypnum_luridum Hlur1305670006290
Hlur1319730052620 hygrohypnum_luridum Hlur1319730052620
Hcur1305670006290 hypnum_curvifolium Hcur1305670006290
Hcur1319730052620 hypnum_curvifolium Hcur1319730052620
Hela478770130460 hypopterygium_elatum Hela478770130460
Hjapcontig_2590108650 hypopterygium_japonicum Hjapcontig_2590108650
Hjapcontig_5380193940 hypopterygium_japonicum Hjapcontig_5380193940