PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
ilex_asprella_Ilex_011282-T1 ilex_asprella ilex_asprella_Ilex_011282-T1
ilex_asprella_Ilex_032400-T1 ilex_asprella ilex_asprella_Ilex_032400-T1
ilex_latifolia_GWHPBIST023462 ilex_latifolia ilex_latifolia_GWHPBIST023462
ilex_latifolia_GWHPBIST023463 ilex_latifolia ilex_latifolia_GWHPBIST023463
iochroma_cyaneum_scaffold20605s005160.1 iochroma_cyaneum iochroma_cyaneum_scaffold20605s005160.1
Itrk_sc0175182.1_g000001.1 ipomoea_batatas Itrk_sc0175182.1_g000001.1
ipomoea_trifida_itf12g18810.t1 ipomoea_trifida ipomoea_trifida_itf12g18810.t1
Itril12G0014250.1 ipomoea_triloba Itril12G0014250.1
Iind00G0037140.1 isatis_indigotica Iind00G0037140.1
ItaiItaiw_v1_scaffold_110073870.1 isoetes_taiwanensis ItaiItaiw_v1_scaffold_110073870.1
ItaiItaiw_v1_scaffold_30214460.1 isoetes_taiwanensis ItaiItaiw_v1_scaffold_30214460.1
Jmim03G0011740.1 jacaranda_mimosifolia Jmim03G0011740.1
Jmim11G0008460.1 jacaranda_mimosifolia Jmim11G0008460.1
Jaut4970330200920 jamesoniella_autumnalis Jaut4970330200920
Jcat12G0012380 juglans_cathayensis Jcat12G0012380
juglans_cinerea_g19878.t1 juglans_cinerea juglans_cinerea_g19878.t1
juglans_cinerea_g25230.t1 juglans_cinerea juglans_cinerea_g25230.t1
Jhin11G0020690 juglans_hindsii Jhin11G0020690
Jhin12G0011660 juglans_hindsii Jhin12G0011660
juglans_mandshurica_rna-Jman004T0185100.1 juglans_mandshurica juglans_mandshurica_rna-Jman004T0185100.1
juglans_mandshurica_rna-Jman014T0054900.1 juglans_mandshurica juglans_mandshurica_rna-Jman014T0054900.1
Jmicscaffold4910248620.1 juglans_microcarpa Jmicscaffold4910248620.1
Jmicscaffold94000393700.1 juglans_microcarpa Jmicscaffold94000393700.1
juglans_microcarpa_x_regia_XP_040988168.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040988168.1
juglans_microcarpa_x_regia_XP_040990603.1 juglans_microcarpa_x_regia juglans_microcarpa_x_regia_XP_040990603.1
Jnigscaffold4770174960.1 juglans_nigra Jnigscaffold4770174960.1
Jnigscaffold70180231890.1 juglans_nigra Jnigscaffold70180231890.1
Jreg02G0015590.1 juglans_regia Jreg02G0015590.1
Jreg09G0009930.1 juglans_regia Jreg09G0009930.1
Jsigscaffold20810068430.1 juglans_sigillata Jsigscaffold20810068430.1