PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Jsigscaffold64810204040.2 juglans_sigillata Jsigscaffold64810204040.2
JereHiC_scaffold_50151290 jungermannia_erectum JereHiC_scaffold_50151290
KfedScaffold_500163200.1 kalanchoe_fedtschenkoi KfedScaffold_500163200.1
KfedScaffold_500163200.2 kalanchoe_fedtschenkoi KfedScaffold_500163200.2
KfedScaffold_500163200.3 kalanchoe_fedtschenkoi KfedScaffold_500163200.3
KfedScaffold_500163200.4 kalanchoe_fedtschenkoi KfedScaffold_500163200.4
kalanchoe_laxiflora_Kalax.0057s0132.1.p kalanchoe_laxiflora kalanchoe_laxiflora_Kalax.0057s0132.1.p
kalanchoe_laxiflora_Kalax.0843s0003.1.p kalanchoe_laxiflora kalanchoe_laxiflora_Kalax.0843s0003.1.p
KoboGWHACBH000000080053090.1 kandelia_obovata KoboGWHACBH000000080053090.1
KoboGWHACBH000000090058630.1 kandelia_obovata KoboGWHACBH000000090058630.1
Lpurscaffold79_cov990189890 lablab_purpureus Lpurscaffold79_cov990189890
Lsat05G0038530.1 lactuca_sativa Lsat05G0038530.1
Lsat06G0024820.1 lactuca_sativa Lsat06G0024820.1
Lsat06G0024820.2 lactuca_sativa Lsat06G0024820.2
Lsic01G0003220.1 lagenaria_siceraria Lsic01G0003220.1
Lsic07G0009020.1 lagenaria_siceraria Lsic07G0009020.1
lagerstroemia_indica_GWHPCAXI030294 lagerstroemia_indica lagerstroemia_indica_GWHPCAXI030294
LalaLA_scaffold13650106430 leavenworthia_alabamica LalaLA_scaffold13650106430
LalaLA_scaffold4320304930 leavenworthia_alabamica LalaLA_scaffold4320304930
Lperr01G0039130.1 leersia_perrieri Lperr01G0039130.1
Lperr02G0022300.1 leersia_perrieri Lperr02G0022300.1
lens_culinaris_Lcu.2RBY.5g002710.1 lens_culinaris lens_culinaris_Lcu.2RBY.5g002710.1
lens_ervoides_Ler.1DRT.5g002920.1 lens_ervoides lens_ervoides_Ler.1DRT.5g002920.1
Lrep1503260021190 lepidozia_reptans Lrep1503260021190
Lrep1602900035200 lepidozia_reptans Lrep1602900035200
leptochloa_chinensis_GWHPBJVB006964 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB006964
leptochloa_chinensis_GWHPBJVB007066 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB007066
leptochloa_chinensis_GWHPBJVB034542 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB034542
leptochloa_chinensis_GWHPBJVB038536 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB038536
leptochloa_chinensis_GWHPBJVB054531 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB054531