PlantSME Plant secondary metabolism enzyme database
MDS/IspF

MDS/IspF

ID: MDS_IspF

Atlas summary family MDS_IspF.

Lineage Coverage
Detected in 756 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pogostemon cablin
Gossypium tomentosum
Physcomitrella patens
Fragaria ananassa
Related Modules
Terpenoid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Terpenoid pathway 1197 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023
MVA precursor branch
AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588
MEP precursor branch
DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720
IPP/DMAPP and prenyl diphosphate extension
IDI 1579 GPPS 135 FPPS 5839 GGPPS 100
Skeleton formation and tailoring
TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019
Family Gene List
GeneSpeciesProtein ID
Lgau2176900157150 leptotheca_gaudichaudii Lgau2176900157150
Lgau2207500237740 leptotheca_gaudichaudii Lgau2207500237740
Leucobryum7854240148410 leucobryum Leucobryum7854240148410
Lalbi7854240148410 leucobryum_albidum Lalbi7854240148410
Lbowcontig_100019330 leucobryum_bowringii Lbowcontig_100019330
Lusiscaffold12530043460.1 linum_usitatissimum Lusiscaffold12530043460.1
Lusiscaffold190107180.1 linum_usitatissimum Lusiscaffold190107180.1
Lusiscaffold5400314000.1 linum_usitatissimum Lusiscaffold5400314000.1
LchiScaffold410223880 liriodendron_chinense LchiScaffold410223880
litchi_chinensis_LITCHI022036.m1 litchi_chinensis litchi_chinensis_LITCHI022036.m1
lithospermum_erythrorhizon_LE05021.1 lithospermum_erythrorhizon lithospermum_erythrorhizon_LE05021.1
LmarGWHANWC000000110218710.1 lobularia_maritima LmarGWHANWC000000110218710.1
Lperescaffold_13281|ref00475570041350.1 lolium_perenne Lperescaffold_13281|ref00475570041350.1
LONjap02G0010550.1 lonicera_japonica LONjap02G0010550.1
LOTjapContig00312_ERROPOS8703570012980.1 lotus_japonicus LOTjapContig00312_ERROPOS8703570012980.1
luffa_cylindrica_Maker00029712 luffa_cylindrica luffa_cylindrica_Maker00029712
Lalb09G0001240.1 lupinus_albus Lalb09G0001240.1
Lang08G0000750.1 lupinus_angustifolius Lang08G0000750.1
Lang17G0001030.1 lupinus_angustifolius Lang17G0001030.1
M158697150098400 m158 M158697150098400
macrotyloma_uniflorum_Mun_sc0002.1_g02750.1 macrotyloma_uniflorum macrotyloma_uniflorum_Mun_sc0002.1_g02750.1
macrotyloma_uniflorum_Mun_sc0147.1_g00520.1 macrotyloma_uniflorum macrotyloma_uniflorum_Mun_sc0147.1_g00520.1
macrotyloma_uniflorum_Mun_sc0147.1_g00620.1 macrotyloma_uniflorum macrotyloma_uniflorum_Mun_sc0147.1_g00620.1
MOolescaffold1950073900.1 malania_oleifera MOolescaffold1950073900.1
genome_MABA007411 malus_baccata genome_MABA007411
genome_MABA019085 malus_baccata genome_MABA019085
Mdom06G0007460.1 malus_domestica Mdom06G0007460.1
Mdom06G0007650.1 malus_domestica Mdom06G0007650.1
Mdom13G0019830.1 malus_domestica Mdom13G0019830.1
Mdom14G0009590.1 malus_domestica Mdom14G0009590.1