PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
LalaLA_scaffold10880070180 Alkaloid 16OMT medium borderline
LalaLA_scaffold12810096630 Alkaloid 16OMT medium borderline
LalaLA_scaffold12810096640 Alkaloid 16OMT medium borderline
LalaLA_scaffold14210111660 Alkaloid 16OMT medium borderline
LalaLA_scaffold15170125270 Alkaloid 16OMT medium borderline
LalaLA_scaffold19110171110 Alkaloid 16OMT medium borderline
LalaLA_scaffold2410214760 Alkaloid 16OMT medium borderline
LalaLA_scaffold27170237600 Alkaloid 16OMT medium borderline
LalaLA_scaffold3890298210 Alkaloid 16OMT low borderline
LalaLA_scaffold8670366520 Alkaloid 16OMT medium borderline
LalaLA_scaffold13020098270 Alkaloid 6OMT_4OMT_SOMT medium borderline
LalaLA_scaffold13020098280 Alkaloid 6OMT_4OMT_SOMT medium borderline
LalaLA_C243990011630 Alkaloid 7DLGT medium pass
LalaLA_scaffold10070060590 Alkaloid 7DLGT medium pass
LalaLA_scaffold10090061690 Alkaloid 7DLGT low borderline
LalaLA_scaffold11150073120 Alkaloid 7DLGT medium pass
LalaLA_scaffold11150073130 Alkaloid 7DLGT medium pass
LalaLA_scaffold11210073720 Alkaloid 7DLGT medium pass
LalaLA_scaffold11260074130 Alkaloid 7DLGT low borderline
LalaLA_scaffold11690082200 Alkaloid 7DLGT medium pass
LalaLA_scaffold11700082540 Alkaloid 7DLGT high pass
LalaLA_scaffold11720083080 Alkaloid 7DLGT high pass
LalaLA_scaffold11910084780 Alkaloid 7DLGT medium pass
LalaLA_scaffold11910084810 Alkaloid 7DLGT low borderline
LalaLA_scaffold120085540 Alkaloid 7DLGT medium pass
LalaLA_scaffold12220089380 Alkaloid 7DLGT medium pass
LalaLA_scaffold12220089390 Alkaloid 7DLGT medium pass
LalaLA_scaffold12720095940 Alkaloid 7DLGT medium pass
LalaLA_scaffold13030098430 Alkaloid 7DLGT low borderline
LalaLA_scaffold1310100400 Alkaloid 7DLGT medium pass
LalaLA_scaffold14660116300 Alkaloid 7DLGT medium pass
LalaLA_scaffold15430128830 Alkaloid 7DLGT low borderline
LalaLA_scaffold15430128840 Alkaloid 7DLGT low borderline
LalaLA_scaffold15490130070 Alkaloid 7DLGT low borderline
LalaLA_scaffold1560131720 Alkaloid 7DLGT low borderline
LalaLA_scaffold1560131730 Alkaloid 7DLGT low borderline
LalaLA_scaffold15960136580 Alkaloid 7DLGT high pass
LalaLA_scaffold15960136600 Alkaloid 7DLGT high pass
LalaLA_scaffold16440141960 Alkaloid 7DLGT low borderline
LalaLA_scaffold17640155430 Alkaloid 7DLGT medium pass
LalaLA_scaffold1780157200 Alkaloid 7DLGT low borderline
LalaLA_scaffold1780157210 Alkaloid 7DLGT low borderline
LalaLA_scaffold18060160150 Alkaloid 7DLGT low borderline
LalaLA_scaffold18330162590 Alkaloid 7DLGT low borderline
LalaLA_scaffold18400163770 Alkaloid 7DLGT low borderline
LalaLA_scaffold18400163780 Alkaloid 7DLGT low borderline
LalaLA_scaffold18400163790 Alkaloid 7DLGT low borderline
LalaLA_scaffold18480165250 Alkaloid 7DLGT low borderline
LalaLA_scaffold21800195530 Alkaloid 7DLGT low borderline
LalaLA_scaffold21860195940 Alkaloid 7DLGT low borderline