Leavenworthia alabamica (leavenworthia_alabamica)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.76% Alkaloid pathway 24.06% Phenylpropanoid pathway 23.18% Flavonoid pathway 11.05% Rosmarinic acid pathway 7.27% Steroid pathway 6.69%

Family Distribution

1376 Candidate Genes

BAHD 6.41% C4H 6.02% C3'H/CYP98A 5.6% POD 5.45% NMT 4.36% CYP76 4.0% 4CL 3.7% IFS 3.43%

Other Families 61.04%

More Families (95)

UGT 111 3.34% 7DLGT 99 2.98% UFGT 97 2.92% T3O 91 2.74% F3H 78 2.35% DWF4/CYP90B1 73 2.2% BR6OX2/CYP85A2 68 2.05% CODM/T6ODM 63 1.9% STR 61 1.84% SMT1/SMT2/SMT3 58 1.74% F3'H/CYP75B 54 1.62% CSE 49 1.47% CYP71 49 1.47% SGD 47 1.41% CAD 45 1.35% IFR 44 1.32% TRI/TRII 40 1.2% H6H 37 1.11% PYKS 36 1.08% LAC 31 0.93% BBE 29 0.87% T16H 28 0.84% CAS 28 0.84% ANR 27 0.81% TPS 25 0.75% G8O/G8H 24 0.72% IO 24 0.72% RAS 24 0.72% FNS 23 0.69% CCR 23 0.69% GES 21 0.63% GS 21 0.63% CYP90D1 20 0.6% 7DLH 19 0.57% F5H/CYP84A 19 0.57% TAT 19 0.57% F3'5'H/CYP75A 18 0.54% HCT 17 0.51% GGPPS 17 0.51% LAMT 16 0.48% ANS/LDOX 16 0.48% SLS 15 0.45% PAL 15 0.45% COMT 15 0.45% 8HGO 12 0.36% CPD/CYP90A1 12 0.36% MPO 11 0.33% PMT 11 0.33% CYP51G1 11 0.33% BR6OX1/CYP85A1 11 0.33% COR 10 0.3% 16OMT 10 0.3% CPR 10 0.3% SQE 10 0.3% AACT 10 0.3% FPPS 10 0.3% CYP80B1 9 0.27% CHS 9 0.27% ROT3/CYP90C1 9 0.27% SMO1/SMO2 9 0.27% NCS 8 0.24% CNMT 7 0.21% CYP719 7 0.21% SQS/FDFT1 7 0.21% DFR 6 0.18% CCoAOMT 6 0.18% HMGR 6 0.18% ISY 5 0.15% DET2 5 0.15% DXS 5 0.15% HDS/IspG 5 0.15% MVK 5 0.15% MVD 5 0.15% CYP80F1 4 0.12% HYD1 4 0.12% IDI 4 0.12% TDC 3 0.09% ADC 3 0.09% CHI 3 0.09% HPPR 3 0.09% DWF7 3 0.09% HDR/IspH 3 0.09% PMK 3 0.09% 6OMT_4OMT_SOMT 2 0.06% TYDC_DDC 2 0.06% FLS 2 0.06% DWF1 2 0.06% DWF5 2 0.06% FK 2 0.06% CMK/IspE 2 0.06% MCT/IspD 2 0.06% MDS/IspF 2 0.06% CPI1 1 0.03% HMGS 1 0.03% DXR 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	382	19	BAHD (155)	View species results
Alkaloid pathway	331	22	NMT (92)	View species results
Phenylpropanoid pathway	319	11	POD (162)	View species results
Flavonoid pathway	152	9	UFGT (94)	View species results
Rosmarinic acid pathway	100	7	C4H (36)	View species results
Steroid pathway	92	12	SMT1/SMT2/SMT3 (32)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1198	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	254	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAD

Gene	Pathway	Family	Confidence	Status	Best Target
LalaLA_C212750008710	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_C299050016780	Phenylpropanoid	CAD	low	borderline	CAD__00010__sp_P48523_CADH4_ARATH
LalaLA_C576650040340	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_C660070048060	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold12320090360	Phenylpropanoid	CAD	low	borderline	CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO
LalaLA_scaffold12390091470	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold12980098110	Phenylpropanoid	CAD	low	borderline	CAD__00014__sp_Q2KNL5_CADH1_OCIBA
LalaLA_scaffold13650106180	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH
LalaLA_scaffold13720107230	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold14450114420	Phenylpropanoid	CAD	medium	pass	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold14450114440	Phenylpropanoid	CAD	medium	pass	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold14560115330	Phenylpropanoid	CAD	medium	pass	CAD__00011__sp_Q02971_CADH7_ARATH
LalaLA_scaffold14600115690	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold15070123000	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold15330127240	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
LalaLA_scaffold15490130140	Phenylpropanoid	CAD	low	borderline	CAD__00008__sp_O49482_CADH5_ARATH
LalaLA_scaffold15990137100	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold16080138070	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold16560142650	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH
LalaLA_scaffold18400163680	Phenylpropanoid	CAD	medium	pass	CAD__00008__sp_O49482_CADH5_ARATH
LalaLA_scaffold220197400	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
LalaLA_scaffold220197410	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
LalaLA_scaffold22050198030	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold22420201250	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold22550202300	Phenylpropanoid	CAD	low	borderline	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
LalaLA_scaffold22660202960	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold24060214300	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold24060214310	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold3110263650	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold34960286390	Phenylpropanoid	CAD	medium	pass	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold36060294080	Phenylpropanoid	CAD	medium	pass	CAD__00008__sp_O49482_CADH5_ARATH
LalaLA_scaffold4370305590	Phenylpropanoid	CAD	medium	pass	CAD__00010__sp_P48523_CADH4_ARATH
LalaLA_scaffold4460307310	Phenylpropanoid	CAD	medium	pass	CAD__00017__sp_Q9SJ25_CADH2_ARATH
LalaLA_scaffold5100315180	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH
LalaLA_scaffold5450319060	Phenylpropanoid	CAD	low	borderline	CAD__00014__sp_Q2KNL5_CADH1_OCIBA
LalaLA_scaffold5570320910	Phenylpropanoid	CAD	medium	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold5660321470	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
LalaLA_scaffold6790338860	Phenylpropanoid	CAD	low	borderline	CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
LalaLA_scaffold7010344380	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold7160346250	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH
LalaLA_scaffold770353910	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold8330360010	Phenylpropanoid	CAD	low	borderline	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
LalaLA_scaffold8790368880	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
LalaLA_scaffold8960371980	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
LalaLA_scaffold930376400	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH