PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
Reset
Gene Pathway Family Confidence Status
LalaLA_C578830040590 Alkaloid T16H medium borderline
LalaLA_C705430053940 Alkaloid T16H medium pass
LalaLA_C706590054130 Alkaloid T16H medium borderline
LalaLA_scaffold1200085580 Alkaloid T16H low borderline
LalaLA_scaffold1200085600 Alkaloid T16H medium borderline
LalaLA_scaffold12250089660 Alkaloid T16H medium borderline
LalaLA_scaffold13090100150 Alkaloid T16H medium borderline
LalaLA_scaffold14580115600 Alkaloid T16H medium borderline
LalaLA_scaffold14680117280 Alkaloid T16H medium borderline
LalaLA_scaffold17780156860 Alkaloid T16H medium borderline
LalaLA_scaffold19290172270 Alkaloid T16H medium borderline
LalaLA_scaffold21970196940 Alkaloid T16H medium borderline
LalaLA_scaffold21970196950 Alkaloid T16H medium borderline
LalaLA_scaffold22270199440 Alkaloid T16H medium borderline
LalaLA_scaffold22270199460 Alkaloid T16H medium borderline
LalaLA_scaffold24300217410 Alkaloid T16H medium borderline
LalaLA_scaffold24460219030 Alkaloid T16H medium borderline
LalaLA_scaffold28750248210 Alkaloid T16H medium borderline
LalaLA_scaffold33410276670 Alkaloid T16H medium borderline
LalaLA_scaffold33610277590 Alkaloid T16H medium borderline
LalaLA_scaffold33610277600 Alkaloid T16H medium borderline
LalaLA_scaffold3420280400 Alkaloid T16H medium borderline
LalaLA_scaffold4790310970 Alkaloid T16H medium pass
LalaLA_scaffold5360318610 Alkaloid T16H medium borderline
LalaLA_scaffold5780324250 Alkaloid T16H medium borderline
LalaLA_scaffold9410378510 Alkaloid T16H medium borderline
LalaLA_scaffold9600381440 Alkaloid T16H medium borderline
LalaLA_scaffold9660382430 Alkaloid T16H medium borderline