Leavenworthia alabamica (leavenworthia_alabamica)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.76% Alkaloid pathway 24.06% Phenylpropanoid pathway 23.18% Flavonoid pathway 11.05% Rosmarinic acid pathway 7.27% Steroid pathway 6.69%

Family Distribution

1376 Candidate Genes

BAHD 6.41% C4H 6.02% C3'H/CYP98A 5.6% POD 5.45% NMT 4.36% CYP76 4.0% 4CL 3.7% IFS 3.43%

Other Families 61.04%

More Families (95)

UGT 111 3.34% 7DLGT 99 2.98% UFGT 97 2.92% T3O 91 2.74% F3H 78 2.35% DWF4/CYP90B1 73 2.2% BR6OX2/CYP85A2 68 2.05% CODM/T6ODM 63 1.9% STR 61 1.84% SMT1/SMT2/SMT3 58 1.74% F3'H/CYP75B 54 1.62% CSE 49 1.47% CYP71 49 1.47% SGD 47 1.41% CAD 45 1.35% IFR 44 1.32% TRI/TRII 40 1.2% H6H 37 1.11% PYKS 36 1.08% LAC 31 0.93% BBE 29 0.87% T16H 28 0.84% CAS 28 0.84% ANR 27 0.81% TPS 25 0.75% G8O/G8H 24 0.72% IO 24 0.72% RAS 24 0.72% FNS 23 0.69% CCR 23 0.69% GES 21 0.63% GS 21 0.63% CYP90D1 20 0.6% 7DLH 19 0.57% F5H/CYP84A 19 0.57% TAT 19 0.57% F3'5'H/CYP75A 18 0.54% HCT 17 0.51% GGPPS 17 0.51% LAMT 16 0.48% ANS/LDOX 16 0.48% SLS 15 0.45% PAL 15 0.45% COMT 15 0.45% 8HGO 12 0.36% CPD/CYP90A1 12 0.36% MPO 11 0.33% PMT 11 0.33% CYP51G1 11 0.33% BR6OX1/CYP85A1 11 0.33% COR 10 0.3% 16OMT 10 0.3% CPR 10 0.3% SQE 10 0.3% AACT 10 0.3% FPPS 10 0.3% CYP80B1 9 0.27% CHS 9 0.27% ROT3/CYP90C1 9 0.27% SMO1/SMO2 9 0.27% NCS 8 0.24% CNMT 7 0.21% CYP719 7 0.21% SQS/FDFT1 7 0.21% DFR 6 0.18% CCoAOMT 6 0.18% HMGR 6 0.18% ISY 5 0.15% DET2 5 0.15% DXS 5 0.15% HDS/IspG 5 0.15% MVK 5 0.15% MVD 5 0.15% CYP80F1 4 0.12% HYD1 4 0.12% IDI 4 0.12% TDC 3 0.09% ADC 3 0.09% CHI 3 0.09% HPPR 3 0.09% DWF7 3 0.09% HDR/IspH 3 0.09% PMK 3 0.09% 6OMT_4OMT_SOMT 2 0.06% TYDC_DDC 2 0.06% FLS 2 0.06% DWF1 2 0.06% DWF5 2 0.06% FK 2 0.06% CMK/IspE 2 0.06% MCT/IspD 2 0.06% MDS/IspF 2 0.06% CPI1 1 0.03% HMGS 1 0.03% DXR 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	382	19	BAHD (155)	View species results
Alkaloid pathway	331	22	NMT (92)	View species results
Phenylpropanoid pathway	319	11	POD (162)	View species results
Flavonoid pathway	152	9	UFGT (94)	View species results
Rosmarinic acid pathway	100	7	C4H (36)	View species results
Steroid pathway	92	12	SMT1/SMT2/SMT3 (32)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1198	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	254	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CCR

Gene	Pathway	Family	Confidence	Status	Best Target
LalaLA_C628110045010	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
LalaLA_C678310049860	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
LalaLA_C686130051160	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
LalaLA_scaffold10090061790	Phenylpropanoid	CCR	medium	pass	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
LalaLA_scaffold11070072220	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
LalaLA_scaffold12590094300	Phenylpropanoid	CCR	medium	borderline	CCR__00009__sp_Q9SAH9_CCR2_ARATH
LalaLA_scaffold13040098550	Phenylpropanoid	CCR	medium	borderline	CCR__00009__sp_Q9SAH9_CCR2_ARATH
LalaLA_scaffold14370113600	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
LalaLA_scaffold16740144040	Phenylpropanoid	CCR	medium	borderline	CCR__00007__sp_Q9CA28_TKPR2_ARATH
LalaLA_scaffold18700166880	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
LalaLA_scaffold21930196610	Phenylpropanoid	CCR	medium	pass	CCR__00009__sp_Q9SAH9_CCR2_ARATH
LalaLA_scaffold260229090	Phenylpropanoid	CCR	medium	borderline	CCR__00008__sp_Q9S9N9_CCR1_ARATH
LalaLA_scaffold27460240710	Phenylpropanoid	CCR	medium	pass	CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
LalaLA_scaffold27940243500	Phenylpropanoid	CCR	medium	borderline	CCR__00008__sp_Q9S9N9_CCR1_ARATH
LalaLA_scaffold3180267770	Phenylpropanoid	CCR	medium	borderline	CCR__00007__sp_Q9CA28_TKPR2_ARATH
LalaLA_scaffold31980269820	Phenylpropanoid	CCR	medium	borderline	CCR__00009__sp_Q9SAH9_CCR2_ARATH
LalaLA_scaffold3420281370	Phenylpropanoid	CCR	medium	borderline	CCR__00001__sp_A0A059TC02_CCR1_PETHY
LalaLA_scaffold35270288790	Phenylpropanoid	CCR	medium	borderline	CCR__00009__sp_Q9SAH9_CCR2_ARATH
LalaLA_scaffold4010299960	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
LalaLA_scaffold4500307790	Phenylpropanoid	CCR	medium	borderline	CCR__00004__sp_G7JEE5_CCR2_MEDTR
LalaLA_scaffold7040344950	Phenylpropanoid	CCR	medium	pass	CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
LalaLA_scaffold9500379790	Phenylpropanoid	CCR	medium	pass	CCR__00009__sp_Q9SAH9_CCR2_ARATH
LalaLA_scaffold9790383880	Phenylpropanoid	CCR	low	borderline	CCR__00006__sp_Q6K9A2_CCR1_ORYSJ