PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
LalaLA_C335330020120 Phenylpropanoid 4CL medium pass
LalaLA_C725430056670 Phenylpropanoid 4CL medium pass
LalaLA_scaffold10360064580 Phenylpropanoid 4CL medium pass
LalaLA_scaffold10370064960 Phenylpropanoid 4CL low borderline
LalaLA_scaffold10580067170 Phenylpropanoid 4CL low borderline
LalaLA_scaffold11140072680 Phenylpropanoid 4CL low borderline
LalaLA_scaffold11470079280 Phenylpropanoid 4CL medium pass
LalaLA_scaffold11540080940 Phenylpropanoid 4CL low borderline
LalaLA_scaffold11830084220 Phenylpropanoid 4CL low borderline
LalaLA_scaffold12810096810 Phenylpropanoid 4CL medium pass
LalaLA_scaffold14270111900 Phenylpropanoid 4CL low borderline
LalaLA_scaffold14910120070 Phenylpropanoid 4CL medium pass
LalaLA_scaffold15430128770 Phenylpropanoid 4CL medium pass
LalaLA_scaffold15980136890 Phenylpropanoid 4CL medium pass
LalaLA_scaffold17100149070 Phenylpropanoid 4CL low borderline
LalaLA_scaffold18640166550 Phenylpropanoid 4CL medium pass
LalaLA_scaffold19190171490 Phenylpropanoid 4CL medium pass
LalaLA_scaffold2020179020 Phenylpropanoid 4CL medium pass
LalaLA_scaffold22550202180 Phenylpropanoid 4CL medium pass
LalaLA_scaffold24940221280 Phenylpropanoid 4CL medium pass
LalaLA_scaffold25190222560 Phenylpropanoid 4CL medium pass
LalaLA_scaffold2520222780 Phenylpropanoid 4CL low borderline
LalaLA_scaffold25390223920 Phenylpropanoid 4CL medium pass
LalaLA_scaffold26900235700 Phenylpropanoid 4CL medium pass
LalaLA_scaffold27170237630 Phenylpropanoid 4CL low borderline
LalaLA_scaffold28500247190 Phenylpropanoid 4CL low borderline
LalaLA_scaffold29200250690 Phenylpropanoid 4CL medium pass
LalaLA_scaffold32190271100 Phenylpropanoid 4CL low borderline
LalaLA_scaffold32240271240 Phenylpropanoid 4CL low borderline
LalaLA_scaffold32720273500 Phenylpropanoid 4CL medium pass
LalaLA_scaffold33730278240 Phenylpropanoid 4CL medium pass
LalaLA_scaffold34610284440 Phenylpropanoid 4CL low borderline
LalaLA_scaffold350286970 Phenylpropanoid 4CL low borderline
LalaLA_scaffold4980313460 Phenylpropanoid 4CL medium pass
LalaLA_scaffold6110331040 Phenylpropanoid 4CL low borderline
LalaLA_scaffold7160346180 Phenylpropanoid 4CL medium pass
LalaLA_scaffold8770368270 Phenylpropanoid 4CL medium pass
LalaLA_scaffold9140374950 Phenylpropanoid 4CL medium pass
LalaLA_scaffold9140374960 Phenylpropanoid 4CL medium pass
LalaLA_scaffold9140374970 Phenylpropanoid 4CL medium pass
LalaLA_scaffold9140374990 Phenylpropanoid 4CL medium pass
LalaLA_C180590005780 Phenylpropanoid C3'H/CYP98A high pass
LalaLA_C243550011590 Phenylpropanoid C3'H/CYP98A low borderline
LalaLA_C488770032920 Phenylpropanoid C3'H/CYP98A medium pass
LalaLA_C488770032930 Phenylpropanoid C3'H/CYP98A medium borderline
LalaLA_C549090038110 Phenylpropanoid C3'H/CYP98A low borderline
LalaLA_C556450038690 Phenylpropanoid C3'H/CYP98A low borderline
LalaLA_C563510039350 Phenylpropanoid C3'H/CYP98A medium borderline
LalaLA_C601170042630 Phenylpropanoid C3'H/CYP98A low borderline
LalaLA_C627270044890 Phenylpropanoid C3'H/CYP98A high pass